Evidence map›Paper›PMID 21900881›Full record

ArticleKidney international2012

Inhibition of histone deacetylases targets the transcription regulator Id2 to attenuate cystic epithelial cell proliferation.

Lucy X Fan, Xinjian Li, Brenda Magenheimer, James P Calvet, Xiaogang Li

Open access · bronzeAbstract read
In one paragraph

Article in Kidney international, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 62 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Histone deacetylases and their inhibitors in kidney diseases.Molecular therapy : the journal of the American Society of Gene Therapy · 2025
    Review
  5. Protein lactylation in kidney diseases.Frontiers in cell and developmental biology · 2025
    Review
  6. Review
  7. Article
  8. Review
  9. Review
  10. Review
  11. Recent Discoveries in Epigenetic Modifications of Polycystic Kidney Disease.International journal of molecular sciences · 2021
    Review
  12. Review
  13. Review
  14. Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Lucy X FanDepartment of Pediatrics, Medical College of Wisconsin, Milwaukee, Wisconsin 53226, USA.
Xinjian Li
Brenda Magenheimer
James P Calvet
Xiaogang Li
Medical College of Wisconsin · USUniversity of Kansas Medical Center · US

Funding

ROLE OF OXIDANT STRESS IN PROGRESSION OF PKDP50DK057301 · NIDDK · UNIVERSITY OF KANSAS MEDICAL CENTER · PI CALVET, JAMES P · 1999 to 2009
$11.3M
ADPKD: Understanding mechanisms, Discovering treatments.R01DK084097 · NIDDK · UNIVERSITY OF KANSAS MEDICAL CENTER · PI LI, XIAOGANG · 2010 to 2018
$2.3M
NIDDK NIH HHS P50 DK057301NIDDK NIH HHS R01 DK084097
6 · The paper itself

Abstract

The pan-histone deacetylase (HDAC) inhibitor, trichostatin A, was found to reduce cyst progression and slow the decline of kidney function in Pkd2 knockout mice, model of autosomal dominant polycystic kidney disease (ADPKD). Here we determine whether HDAC inhibition acts by regulating cell proliferation to prevent cyst formation, or by other mechanisms. The loss of Pkd1 caused an upregulation of the inhibitor of differentiation 2 (Id2), a transcription regulator, triggering an Id2-mediated downregulation of p21 in mutant mouse embryonic kidney cells in vitro. Using mouse embryonic kidney cells, mutant for Pkd1, we found that trichostatin A decreased Id2, which resulted in upregulation of p21. Further, phosphorylated retinoblastoma (Rb), usually regulated by Cdk2/Cdk4 activity, was also reduced in these cells. Since these latter enzymes are under the control of p21, these studies suggest that the proliferation of cyst epithelial cells that is reduced by trichostatin A might result from p21 upregulation, or alternatively through the Rb-E2F pathway. Additional studies showed that Id2 directly bound to Rb, releasing the transcription activator E2F from transcriptionally inactive Rb-E2F complexes. HDAC inhibition was able to reverse this process by downregulation of Id2. Furthermore, treatment of pregnant Pkd1 mice with trichostatin A prevented cyst formation in the developing embryonic kidneys, showing that this inhibition is effective in vivo during early cyst formation. Thus, HDAC inhibition targets Id2-mediated pathways to downregulate cystic epithelial cell proliferation and hence cystogenesis.

Indexed as

AnimalsCell ProliferationDisease Models, AnimalEpithelial CellsFemaleHistone Deacetylase InhibitorsHydroxamic AcidsInhibitor of Differentiation Protein 2KidneyMaleMiceMice, KnockoutPolycystic Kidney, Autosomal DominantPregnancySignal TransductionTRPP Cation ChannelsHistone Deacetylase InhibitorsHydroxamic AcidsIdb2 protein, mouseInhibitor of Differentiation Protein 2trichostatin ATRPP Cation Channels

Identifiers

PMID21900881
PMCPMC3409467
OpenAlexW2051550860

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.