Evidence map›Paper›PMID 21900387›Full record

ArticleGenome research2011

A metabolomic and systems biology perspective on the brain of the fragile X syndrome mouse model.

Laetitia Davidovic, Vincent Navratil, Carmela M Bonaccorso, Maria Vincenza Catania, Barbara Bardoni, Marc-Emmanuel Dumas

Open access · bronzeAbstract read
In one paragraph

Article in Genome research, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 65 papers.

0numbers the graph read from it
0cells of the map it votes in
65citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

65 citing papers in PubMed, 110 citations in OpenAlex.

  1. Trial
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  10. Article
  11. Review
  12. FMRP regulates GABACell reports · 2022
    Article
  13. Article
  14. Review
  15. Review
  16. Channelopathies in fragile X syndrome.Nature reviews. Neuroscience · 2021
    Review
  17. Article
  18. Article
  19. Article
  20. Article

5 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 3 countries.

Laetitia DavidovicInstitut de Pharmacologie Moléculaire et Cellulaire, CNRS UMR 6097, 06560 Valbonne, France. davidovic@ipmc.cnrs.fr
Vincent Navratil
Carmela M Bonaccorso
Maria Vincenza Catania
Barbara Bardoni
Marc-Emmanuel Dumas
Centre National de la Recherche Scientifique · FROasi Maria SS · ITUniversité Claude Bernard Lyon 1 · FR

Funding

Telethon GGP07264
6 · The paper itself

Abstract

Fragile X syndrome (FXS) is the first cause of inherited intellectual disability, due to the silencing of the X-linked Fragile X Mental Retardation 1 gene encoding the RNA-binding protein FMRP. While extensive studies have focused on the cellular and molecular basis of FXS, neither human Fragile X patients nor the mouse model of FXS--the Fmr1-null mouse--have been profiled systematically at the metabolic and neurochemical level to provide a complementary perspective on the current, yet scattered, knowledge of FXS. Using proton high-resolution magic angle spinning nuclear magnetic resonance ((1)H HR-MAS NMR)-based metabolic profiling, we have identified a metabolic signature and biomarkers associated with FXS in various brain regions of Fmr1-deficient mice. Our study highlights for the first time that Fmr1 gene inactivation has profound, albeit coordinated consequences in brain metabolism leading to alterations in: (1) neurotransmitter levels, (2) osmoregulation, (3) energy metabolism, and (4) oxidative stress response. To functionally connect Fmr1-deficiency to its metabolic biomarkers, we derived a functional interaction network based on the existing knowledge (literature and databases) and show that the FXS metabolic response is initiated by distinct mRNA targets and proteins interacting with FMRP, and then relayed by numerous regulatory proteins. This novel "integrated metabolome and interactome mapping" (iMIM) approach advantageously unifies novel metabolic findings with previously unrelated knowledge and highlights the contribution of novel cellular pathways to the pathophysiology of FXS. These metabolomic and integrative systems biology strategies will contribute to the development of potential drug targets and novel therapeutic interventions, which will eventually benefit FXS patients.

Indexed as

Brain ChemistryFragile X Messenger Ribonucleoprotein 1MetabolomeAnimalsBiomarkersBrainDisease Models, AnimalDrug Delivery SystemsFragile X SyndromeHumansMiceMice, KnockoutSystems BiologyBiomarkersFmr1 protein, mouseFragile X Messenger Ribonucleoprotein 1

Identifiers

PMID21900387
PMCPMC3227107
OpenAlexW2161560128

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.