ArticleDNA research : an international journal for rapid publication of reports on genes and genomes2011
Whole-genome sequencing of sake yeast Saccharomyces cerevisiae Kyokai no. 7.
Article in DNA research : an international journal for rapid publication of reports on genes and genomes, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 71 papers.
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71 citing papers in PubMed, 152 citations in OpenAlex.
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- Fermentation characteristics and industrial potential ofMycoscience · 2026Article
- The Use of Non-Conventional Yeast in Sake Production.Molecules (Basel, Switzerland) · 2025Article
- Efficient genes identification via quantitative trait loci analysis by crossbreeding of sake and laboratory yeast.Applied microbiology and biotechnology · 2025Article
- Conversion of polyploid and alloploid Saccharomyces sensu stricto strains to leu2 mutants by genome DNA editing.Applied microbiology and biotechnology · 2024Article
- Identification and enzymatic properties of arginine decarboxylase fromApplied and environmental microbiology · 2024Article
- Glazing Affects the Fermentation Process of Sake Brewed in Pottery.Foods (Basel, Switzerland) · 2023Article
- Integrated genomics and phenotype microarray analysis of Saccharomyces cerevisiae industrial strains for rice wine fermentation and recombinant protein production.Microbial biotechnology · 2023Article
- Production of S-methyl-methionine using engineered Saccharomyces cerevisiae sake K6.Journal of industrial microbiology & biotechnology · 2023Article
- Progress of Molecular Display Technology UsingMicroorganisms · 2023Review
- A widespread inversion polymorphism conserved among Saccharomyces species is caused by recurrent homogenization of a sporulation gene family.PLoS genetics · 2022Article
- Draft Genome Sequence of Saccharomyces cerevisiae DJJ01, Isolated from Dojoji Temple in Gobo, Wakayama, Japan.Microbiology resource announcements · 2022Article
- Construction of a synthetic Saccharomyces cerevisiae pan-genome neo-chromosome.Nature communications · 2022Article
- Visualizing the next frontiers in wine yeast research.FEMS yeast research · 2022Article
- Metataxonomic Analysis of Grape Microbiota During Wine Fermentation Reveals the Distinction of Cyprus RegionalFrontiers in microbiology · 2021Article
- Genomic information ofAIMS microbiology · 2021Article
- Fungal evolution: cellular, genomic and metabolic complexity.Biological reviews of the Cambridge Philosophical Society · 2020Article
- Research advances on sake rice, koji, and sake yeast: A review.Food science & nutrition · 2020Review
11 more citing papers are in PubMed but not listed here.
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35 authors at 20 institutions in 2 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
The term 'sake yeast' is generally used to indicate the Saccharomyces cerevisiae strains that possess characteristics distinct from others including the laboratory strain S288C and are well suited for sake brewery. Here, we report the draft whole-genome shotgun sequence of a commonly used diploid sake yeast strain, Kyokai no. 7 (K7). The assembled sequence of K7 was nearly identical to that of the S288C, except for several subtelomeric polymorphisms and two large inversions in K7. A survey of heterozygous bases between the homologous chromosomes revealed the presence of mosaic-like uneven distribution of heterozygosity in K7. The distribution patterns appeared to have resulted from repeated losses of heterozygosity in the ancestral lineage of K7. Analysis of genes revealed the presence of both K7-acquired and K7-lost genes, in addition to numerous others with segmentations and terminal discrepancies in comparison with those of S288C. The distribution of Ty element also largely differed in the two strains. Interestingly, two regions in chromosomes I and VII of S288C have apparently been replaced by Ty elements in K7. Sequence comparisons suggest that these gene conversions were caused by cDNA-mediated recombination of Ty elements. The present study advances our understanding of the functional and evolutionary genomics of the sake yeast.
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