Evidence map›Paper›PMID 21897748›Full record

ArticleMolecular vision2011

A recurrent missense mutation in GJA3 associated with autosomal dominant cataract linked to chromosome 13q.

Thomas M Bennett, Alan Shiels

Open access · greenAbstract read
In one paragraph

Article in Molecular vision, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.9field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
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  3. Review
  4. Article
  5. Article
  6. Connexin mutants and cataracts.Frontiers in pharmacology · 2013
    Article
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  8. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Thomas M BennettDepartment of Ophthalmology and Visual Sciences, Washington University School of Medicine, St Louis, MO, USA.
Alan Shiels

Funding

WASHINGTON UNIVERSITY CENTER VISION RESEARCHP30EY002687 · NEI · WASHINGTON UNIVERSITY · PI Philip Andrew Ruzycki · 1985 to 2026
$18.4M
HUMAN LENS CONNEXIN GENES IN HEREDITARY CATARACTR01EY012284 · NEI · WASHINGTON UNIVERSITY · PI SHIELS, ALAN · 1998 to 2014
$5.4M
NEI NIH HHS EY012284NEI NIH HHS EY02687NEI NIH HHS P30 EY002687NEI NIH HHS R01 EY012284
6 · The paper itself

Abstract

purposeTo map and identify the genetic defect underlying autosomal dominant cataract segregating in a 5-generation Caucasian American family.

methodsGenomic DNA was prepared from blood leukocytes, genotyping was performed using microsatellite markers, and logarithm of the odds (LOD) scores were calculated using the LINKAGE programs. Mutation profiling was performed using direct exon cycle-sequencing and restriction fragment analysis. Protein function effects were evaluated using in silico prediction algorithms.

resultsSignificant evidence of linkage was obtained at marker D13S175 (maximum LOD score [Z(max)]=3.67; maximum recombination fraction [θ(max)]=0.04) and D13S1316 (Z(max)=2.80, θ(max)=0.0). Haplotyping indicated that the disease lay in the ~170 Kb physical interval between D13S1316 and D13S175, which contained the gene for gap-junction protein alpha-3 (GJA3) or connexin-46. Sequencing of GJA3 detected a heterozygous transition (c.130G>A) in exon-2 that resulted in gain of an Hsp92 II restriction site. Allele-specific PCR amplification and restriction analysis confirmed that the novel Hsp92 II site co-segregated with cataract in the family but was not detected in 192 normal unrelated individuals. The c.130G>A transition was predicted to result in a non-conservative substitution of valine-to-methionine at codon 44 (p.V44M) with damaging effects on protein function.

conclusionsThese data confirm GJA3 as one of the most frequently mutated genes that underlie autosomal dominant cataract in humans, and further emphasize the importance of connexin function in maintaining lens transparency.

Indexed as

Lens, CrystallineAllelesBase SequenceCase-Control StudiesCataractChromosome DisordersChromosomes, Human, Pair 13ConnexinsDNA Mutational AnalysisFemaleGenes, DominantGenetic LinkageGenotypeHaplotypesHumansLod ScoreConnexinsGJA3 protein, human

Identifiers

PMID21897748
PMCPMC3164684
OpenAlexW1825846014

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.