Evidence map›Paper›PMID 21896763›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2011

MicroRNAs and phylogenomics resolve the relationships of Tardigrada and suggest that velvet worms are the sister group of Arthropoda.

Lahcen I Campbell, Omar Rota-Stabelli, Gregory D Edgecombe, Trevor Marchioro, Stuart J Longhorn, Maximilian J Telford, Hervé Philippe, Lorena Rebecchi, Kevin J Peterson, Davide Pisani

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 92 papers.

0numbers the graph read from it
0cells of the map it votes in
92citing papers in PubMed
44.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

92 citing papers in PubMed, 233 citations in OpenAlex.

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  16. Evolutionary History of TOPIIA Topoisomerases in Animals.Journal of molecular evolution · 2022
    Article
  17. Serial Homology and Segment Identity in the Arthropod Head.Integrative organismal biology (Oxford, England) · 2022
    Article
  18. Extensive loss of Wnt genes in Tardigrada.BMC ecology and evolution · 2021
    Article
  19. Article
  20. Article

32 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 6 institutions in 5 countries.

Lahcen I CampbellDepartment of Biology, The National University of Ireland, Maynooth, Kildare, Ireland.
Omar Rota-Stabelli
Gregory D Edgecombe
Trevor Marchioro
Stuart J Longhorn
Maximilian J Telford
Hervé Philippe
Lorena Rebecchi
Kevin J Peterson
Davide Pisani
National University of Ireland, Maynooth · IEUniversity of Modena and Reggio Emilia · ITDartmouth College · USNatural History Museum · GBUniversité de Montréal · CAUniversity College London · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Morphological data traditionally group Tardigrada (water bears), Onychophora (velvet worms), and Arthropoda (e.g., spiders, insects, and their allies) into a monophyletic group of invertebrates with walking appendages known as the Panarthropoda. However, molecular data generally do not support the inclusion of tardigrades within the Panarthropoda, but instead place them closer to Nematoda (roundworms). Here we present results from the analyses of two independent genomic datasets, expressed sequence tags (ESTs) and microRNAs (miRNAs), which congruently resolve the phylogenetic relationships of Tardigrada. Our EST analyses, based on 49,023 amino acid sites from 255 proteins, significantly support a monophyletic Panarthropoda including Tardigrada and suggest a sister group relationship between Arthropoda and Onychophora. Using careful experimental manipulations--comparisons of model fit, signal dissection, and taxonomic pruning--we show that support for a Tardigrada + Nematoda group derives from the phylogenetic artifact of long-branch attraction. Our small RNA libraries fully support our EST results; no miRNAs were found to link Tardigrada and Nematoda, whereas all panarthropods were found to share one unique miRNA (miR-276). In addition, Onychophora and Arthropoda were found to share a second miRNA (miR-305). Our study confirms the monophyly of the legged ecdysozoans, shows that past support for a Tardigrada + Nematoda group was due to long-branch attraction, and suggests that the velvet worms are the sister group to the arthropods.

Indexed as

PhylogenyAnimalsArthropodsBayes TheoremExpressed Sequence TagsGene LibraryGenomicsInvertebratesMicroRNAsModels, GeneticTardigradaMicroRNAs

Identifiers

PMID21896763
PMCPMC3179045
OpenAlexW1975391522

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.