Evidence map›Paper›PMID 21896721›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2011

Function of leukemogenic mixed lineage leukemia 1 (MLL) fusion proteins through distinct partner protein complexes.

Debabrata Biswas, Thomas A Milne, Venkatesha Basrur, Jaehoon Kim, Kojo S J Elenitoba-Johnson, C David Allis, Robert G Roeder

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 113 papers.

0numbers the graph read from it
0cells of the map it votes in
113citing papers in PubMed
7.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

113 citing papers in PubMed, 167 citations in OpenAlex.

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53 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 3 countries.

Debabrata BiswasLaboratory of Biochemistry and Molecular Biology, The Rockefeller University, New York, NY 10065, USA.
Thomas A Milne
Venkatesha Basrur
Jaehoon Kim
Kojo S J Elenitoba-Johnson
C David Allis
Robert G Roeder
Laboratoire de Biochimie · FRUniversity of Michigan–Ann Arbor · USJohn Radcliffe Hospital · GBRockefeller University · US

Funding

Mechanisms of p53 target gene activation in DNA damage responsesR01CA129325 · NCI · ROCKEFELLER UNIVERSITY · PI ROEDER, ROBERT G · 2007 to 2011
$4.0M
Role of OCA-B in B cell differentiation and malignancyR01CA113872 · NCI · ROCKEFELLER UNIVERSITY · PI ROEDER, ROBERT G · 2005 to 2009
$2.6M
NCI NIH HHS CA113872NCI NIH HHS CA129325NCI NIH HHS R01 CA113872NCI NIH HHS R01 CA129325
6 · The paper itself

Abstract

A number of acute leukemias arise from fusion of the mixed lineage leukemia 1 protein (MLL) N terminus to a variety of fusion partners that have been reported to reside in one or more poorly defined complexes linked to transcription elongation through interactions with the histone H3-K79 methyltransferase DOT1 and positive transcription elongation factor b (P-TEFb). Here we first identify natural complexes (purified through fusion partners AF9, AF4, and ELL) with overlapping components, different elongation activities, and different cofactor associations that suggest dynamic interactions. Then, through reconstitution of defined, functionally active minimal complexes, we identify stable subcomplexes that, through newly defined protein-protein interactions, form distinct higher order complexes. These definitive analyses show, for example, that (i) through direct interactions with AF9 and cyclinT1, family members AF4 and AFF4 independently mediate association of P-TEFb with AF9, (ii) P-TEFb, through direct interactions, provides the link for association of ELL and ELL-associated factors 1 and 2 (EAF1 and EAF2) with AF4, and (iii) in the absence of other factors, DOT1 forms a stable complex with AF9 and does not interact with AF9•AF4•P-TEFb complexes. Finally, we show the importance of defined higher order complex formation in MLL-AF9-mediated transcriptional up-regulation and cell immortalization potential in vivo. Thus, our study provides direct mechanistic insight into the role of fusion partners in MLL fusion-mediated leukemogenesis.

Indexed as

AnimalsBinding SitesCell LineCells, CulturedCell Transformation, NeoplasticDNA-Binding ProteinsHEK293 CellsHistone-Lysine N-MethyltransferaseHistonesHomeodomain ProteinsHumansImmunoblottingLeukemiaMethyltransferasesMiceMultiprotein ComplexesAff1 protein, mouseDNA-Binding ProteinsDot1l protein, mouseHistone-Lysine N-MethyltransferaseHistoneshomeobox protein HOXA9Homeodomain ProteinsMethyltransferasesMllt3 protein, mouseMultiprotein ComplexesMyeloid-Lymphoid Leukemia ProteinNuclear ProteinsOncogene Proteins, FusionPositive Transcriptional Elongation Factor B

Identifiers

PMID21896721
PMCPMC3179097
OpenAlexW2112075818

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.