Evidence map›Paper›PMID 21889481›Full record

ArticleThe American journal of pathology2011

RNA Foci, CUGBP1, and ZNF9 are the primary targets of the mutant CUG and CCUG repeats expanded in myotonic dystrophies type 1 and type 2.

Karlie Jones, Bingwen Jin, Polina Iakova, Claudia Huichalaf, Partha Sarkar, Christiane Schneider-Gold, Benedikt Schoser, Giovanni Meola, Ann-Bin Shyu, Nikolai Timchenko and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in The American journal of pathology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
2.0field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 38 citations in OpenAlex.

  1. Article
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  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Review
  9. Review
  10. Article
  11. Article
  12. (CCUG)Disease models & mechanisms · 2017
    Article
  13. Article
  14. Reduction of toxic RNAs in myotonic dystrophies type 1 and type 2 by the RNA helicase p68/DDX5.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. Molecular mechanisms of muscle atrophy in myotonic dystrophies.The international journal of biochemistry & cell biology · 2013
    Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 6 institutions in 3 countries.

Karlie JonesDepartment of Molecular Physiology and Biophysics, Baylor College of Medicine, Houston, Texas, USA.
Bingwen Jin
Polina Iakova
Claudia Huichalaf
Partha Sarkar
Christiane Schneider-Gold
Benedikt Schoser
Giovanni Meola
Ann-Bin Shyu
Nikolai Timchenko
Lubov Timchenko
Baylor College of Medicine · USLudwig-Maximilians-Universität München · DESt. Josef-Hospital · DEThe University of Texas Medical Branch at Galveston · USUniversity of Houston · USUniversity of Milan · IT

Funding

Molecular Physiology of the Cardiovascular SystemT32HL007676 · NHLBI · BAYLOR COLLEGE OF MEDICINE · PI HAMILTON, SUSAN L · 1989 to 2020
$7.9M
Messenger RNA Turnover in Mammalian CellsR01GM046454 · NIGMS · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI SHYU, ANN-BIN · 1991 to 2016
$7.1M
Molecular Mechanisms of C/EBP Alpha Mediated Growth ArrestR01GM055188 · NIGMS · CINCINNATI CHILDRENS HOSP MED CTR · PI TIMCHENKO, NIKOLAI A. · 1997 to 2013
$3.3M
Myotonic Dystrophy Type 2R01AR052791 · NIAMS · CINCINNATI CHILDRENS HOSP MED CTR · PI TIMCHENKO, LUBOV T · 2005 to 2015
$3.1M
Molecular mechanisms of Myotonic Dystrophy 1R01AR044387 · NIAMS · CINCINNATI CHILDRENS HOSP MED CTR · PI TIMCHENKO, LUBOV T · 1997 to 2012
$2.8M
Regulation of Cell Growth by RNA Binding ProteinsR01CA100070 · NCI · BAYLOR COLLEGE OF MEDICINE · PI TIMCHENKO, NIKOLAI A. · 2003 to 2012
$2.6M
Role of Age in Liver CancerR01CA159942 · NCI · CINCINNATI CHILDRENS HOSP MED CTR · PI TIMCHENKO, NIKOLAI A. · 2011 to 2015
$1.6M
Testing the role of chromatin in healthspanR21AG039885 · NIA · BAYLOR COLLEGE OF MEDICINE · PI TIMCHENKO, NIKOLAI A. · 2011 to 2012
$353k
Mechanisms of decay of toxic CUGn RNA in DM1 patientsR03NS063298 · NINDS · BAYLOR COLLEGE OF MEDICINE · PI TIMCHENKO, LUBOV T · 2008 to 2009
$154k
NCI NIH HHS CA100070NCI NIH HHS CA159942NCI NIH HHS R01 CA100070NCI NIH HHS R01 CA159942NHLBI NIH HHS 2T32HL007676-21A1NHLBI NIH HHS T32 HL007676NIAMS NIH HHS AR044387NIAMS NIH HHS AR052791NIAMS NIH HHS R01 AR044387NIAMS NIH HHS R01 AR052791NIA NIH HHS AG039885NIA NIH HHS R21 AG039885NIGMS NIH HHS GM55188NIGMS NIH HHS R01 GM046454NIGMS NIH HHS R01 GM055188NINDS NIH HHS NS063298NINDS NIH HHS R03 NS063298
6 · The paper itself

Abstract

Expansions of noncoding CUG and CCUG repeats in myotonic dystrophies type 1 (DM1) and DM2 cause complex molecular pathology, the features of which include accumulation of RNA aggregates and misregulation of the RNA-binding proteins muscleblind-like 1 (MBNL1) and CUG-binding protein 1 (CUGBP1). CCUG repeats also decrease amounts of the nucleic acid binding protein ZNF9. Using tetracycline (Tet)-regulated monoclonal cell models that express CUG and CCUG repeats, we found that low levels of long CUG and CCUG repeats result in nuclear and cytoplasmic RNA aggregation with a simultaneous increase of CUGBP1 and a reduction of ZNF9. Elevation of CUGBP1 and reduction of ZNF9 were also observed before strong aggregation of the mutant CUG/CCUG repeats. Degradation of CUG and CCUG repeats normalizes ZNF9 and CUGBP1 levels. Comparison of short and long CUG and CCUG RNAs showed that great expression of short repeats form foci and alter CUGBP1 and ZNF9; however, long CUG/CCUG repeats misregulate CUGBP1 and ZNF9 much faster than high levels of the short repeats. These data suggest that correction of DM1 and DM2 might be achieved by complete and efficient degradation of CUG and CCUG repeats or by a simultaneous disruption of CUG/CCUG foci and correction of CUGBP1 and ZNF9.

Indexed as

CELF1 ProteinCell LineDoxycyclineHumansMutationMyotonic DisordersMyotonic DystrophyRNARNA-Binding ProteinsTranscription, GeneticCELF1 ProteinCELF1 protein, humanCNBP protein, humanDoxycyclineRNARNA-Binding Proteins

Identifiers

PMID21889481
PMCPMC3204036
OpenAlexW2050193524

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.