Evidence map›Paper›PMID 21889464›Full record

ArticleBiophysical journal2011

A modified FCCS procedure applied to Ly49A-MHC class I cis-interaction studies in cell membranes.

Johan Strömqvist, Sofia Johansson, Lei Xu, Yu Ohsugi, Katja Andersson, Hideki Muto, Masataka Kinjo, Petter Höglund, Jerker Widengren

Abstract read
In one paragraph

Article in Biophysical journal, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Article
  2. EphA2 and Ephrin-A1 Utilize the Same Interface for BothbioRxiv : the preprint server for biology · 2025
    Article
  3. Annual review of cell and developmental biology · 2023
    Review
  4. Article
  5. Article
  6. Article
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  11. Article
  12. Article
  13. Correcting for spectral cross-talk in dual-color fluorescence cross-correlation spectroscopy.Chemphyschem : a European journal of chemical physics and physical chemistry · 2012
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Johan StrömqvistExperimental Biomolecular Physics, Department of Applied Physics, Royal Institute of Technology, AlbaNova University Center, Stockholm, Sweden.
Sofia Johansson
Lei Xu
Yu Ohsugi
Katja Andersson
Hideki Muto
Masataka Kinjo
Petter Höglund
Jerker Widengren

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The activity of natural killer (NK) cells is regulated by a fine-tuned balance between activating and inhibitory receptors. Dual-color fluorescence cross-correlation spectroscopy (FCCS) was used to directly demonstrate a so-called cis-interaction between a member of the inhibitory NK cell receptor family Ly49 (Ly49A), and its ligand, the major histocompatibility complex (MHC) class I, within the plasma membrane of the same cell. By a refined FCCS model, calibrated by positive and negative control experiments on cells from the same lymphoid cell line, concentrations and diffusion coefficients of free and interacting proteins could be determined on a collection of cells. Using the intrinsic intercellular variation of their expression levels for titration, it was found that the fraction of Ly49A receptors bound in cis increase with increasing amounts of MHC class I ligand. This increase shows a tendency to be more abrupt than for a diffusion limited - three dimensional bimolecular reaction, which most likely reflects the two-dimensional confinement of the reaction. For the Ly49A- MHC class I interaction it indicates that within a critical concentration range the local concentration level of MHC class I can provide a distinct regulation mechanism of the NK cell activity.

Indexed as

AllelesAnimalsCell Line, TumorCell MembraneCell SurvivalDiffusionGreen Fluorescent ProteinsHLA AntigensMiceNK Cell Lectin-Like Receptor Subfamily AProtein BindingSpectrometry, Fluorescenceenhanced green fluorescent proteinGreen Fluorescent ProteinsHLA AntigensNK Cell Lectin-Like Receptor Subfamily A

Identifiers

PMID21889464
PMCPMC3164190

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.