Evidence map›Paper›PMID 21889355›Full record

ReviewTrends in endocrinology and metabolism: TEM2011

Androgen receptor-driven chromatin looping in prostate cancer.

Dayong Wu, Chunpeng Zhang, Yanping Shen, Kenneth P Nephew, Qianben Wang

Abstract readReview
In one paragraph

Review in Trends in endocrinology and metabolism: TEM, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
6.7field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 51 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Review
  5. Article
  6. Review
  7. Complexities of Prostate Cancer.International journal of molecular sciences · 2022
    Review
  8. Review
  9. Article
  10. Chromosome Conformation Capture Reveals Two Elements That Interact with theInternational journal of molecular sciences · 2019
    Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Dayong WuDepartment of Molecular and Cellular Biochemistry and the Comprehensive Cancer Center, The Ohio State University College of Medicine, Columbus, OH 43210, USA.
Chunpeng Zhang
Yanping Shen
Kenneth P Nephew
Qianben Wang
The Ohio State University · USIndiana University School of Medicine

Funding

Predicting Drug Resistance in Cancer Genomes by DMA Methylation ProfilingU54CA113001 · NCI · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI HUANG, TIM H.-M. · 2004 to 2014
$16.1M
Regulation of androgen receptor function by H3K4 methylation in prostate cancerR01CA151979 · NCI · OHIO STATE UNIVERSITY · PI WANG, QIANBEN · 2011 to 2015
$1.6M
Genome-Wide Analysis of Transcription Factor Function in Prostate CancerR00CA126160 · NCI · OHIO STATE UNIVERSITY · PI WANG, QIANBEN · 2009 to 2011
$764k
NCI NIH HHS R00 CA126160NCI NIH HHS R01 CA151979NCI NIH HHS U54 CA113001
6 · The paper itself

Abstract

The androgen receptor (AR) is important for prostate cancer development and progression. Genome-wide mapping of AR binding sites in prostate cancer has found that the majority of AR binding sites are located within non-promoter regions. These distal AR binding regions regulate AR target genes (e.g. UBE2C) involved in prostate cancer growth through chromatin looping. In addition to long-distance gene regulation, looping has been shown to induce spatial proximity of two genes otherwise located far away along the genomic sequence and the formation of double-strand DNA breaks, resulting in aberrant gene fusions (e.g. TMPRSS2-ERG) that also contribute to prostate tumorigenesis. Elucidating the mechanisms of AR-driven chromatin looping will increase our understanding of prostate carcinogenesis and may lead to the identification of new therapeutic targets.

Indexed as

Chromatin Assembly and DisassemblySignal TransductionAndrogensAnimalsCarcinogensGene FusionHumansMaleMolecular Targeted TherapyMutant Chimeric ProteinsNeoplasm ProteinsProstatic NeoplasmsReceptors, AndrogenAndrogensCarcinogensMutant Chimeric ProteinsNeoplasm ProteinsReceptors, Androgen

Identifiers

PMID21889355
PMCPMC3229688
OpenAlexW2059433128

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.