Evidence map›Paper›PMID 21886099›Full record

ArticleNature protocols2011

Investigating protein-protein interactions in living cells using fluorescence lifetime imaging microscopy.

Yuansheng Sun, Richard N Day, Ammasi Periasamy

Abstract read
In one paragraph

Article in Nature protocols, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 102 papers.

0numbers the graph read from it
0cells of the map it votes in
102citing papers in PubMed
18.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

102 citing papers in PubMed, 244 citations in OpenAlex.

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  12. Light-field tomographic fluorescence lifetime imaging microscopy.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
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42 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Yuansheng SunW.M. Keck Center for Cellular Imaging, Department of Biology, University of Virginia, Charlottesville, Virginia, USA.
Richard N Day
Ammasi Periasamy
Indiana University School of MedicineUniversity of Virginia · US

Funding

S-nitrosothiol signaling in pulmonary epithelial cellsP01HL101871 · NHLBI · UNIVERSITY OF VIRGINIA · PI GASTON, BENJAMIN, LEWIS, STEPHEN JOHN · 2011 to 2015
$8.7M
SPECIFIC REPRESSION OF PROLACTIN GENE EXPRESSIONR01DK043701 · NIDDK · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI DAY, RICHARD N · 1994 to 2012
$3.4M
Frequency-domain Fluorescence Lifetime Imaging Microscopy (FD-FLIM)S10RR027409 · NCRR · UNIVERSITY OF VIRGINIA · PI PERIASAMY, AMMASI · 2010 to 2010
$347k
NCRR NIH HHS RR027409NCRR NIH HHS S10 RR027409NHLBI NIH HHS P01 HL101871NHLBI NIH HHS P01HL101871NIDDK NIH HHS 2R01 DK43701NIDDK NIH HHS 3R01 DK43701-15S1NIDDK NIH HHS R01 DK043701
6 · The paper itself

Abstract

Fluorescence lifetime imaging microscopy (FLIM) is now routinely used for dynamic measurements of signaling events inside living cells, including detection of protein-protein interactions. An understanding of the basic physics of fluorescence lifetime measurements is required to use this technique. In this protocol, we describe both the time-correlated single photon counting and the frequency-domain methods for FLIM data acquisition and analysis. We describe calibration of both FLIM systems, and demonstrate how they are used to measure the quenched donor fluorescence lifetime that results from Förster resonance energy transfer (FRET). We then show how the FLIM-FRET methods are used to detect the dimerization of the transcription factor CCAAT/enhancer binding protein-α in live mouse pituitary cell nuclei. Notably, the factors required for accurate determination and reproducibility of lifetime measurements are described. With either method, the entire protocol including specimen preparation, imaging and data analysis takes ∼2 d.

Indexed as

AnimalsCalibrationCCAAT-Enhancer-Binding Protein-alphaDimerizationFluorescence Resonance Energy TransferMiceMicroscopy, FluorescencePituitary GlandProtein Interaction MappingSignal TransductionCCAAT-Enhancer-Binding Protein-alpha

Identifiers

PMID21886099
PMCPMC3169422
OpenAlexW2047471429

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.