Evidence map›Paper›PMID 21883975›Full record

ArticleMicrobial biotechnology2011

Growth phase-associated changes in the proteome and transcriptome of Lactobacillus rhamnosus GG in industrial-type whey medium.

Kati Laakso, Kerttu Koskenniemi, Johanna Koponen, Matti Kankainen, Anu Surakka, Tuomas Salusjärvi, Petri Auvinen, Kirsi Savijoki, Tuula A Nyman, Nisse Kalkkinen and 2 more

Abstract read
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Article in Microbial biotechnology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed.

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  12. Investigating Differential Expressed Genes ofFoods (Basel, Switzerland) · 2022
    Article
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  15. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Kati LaaksoResearch and Development, Valio Ltd, Helsinki, Finland.
Kerttu Koskenniemi
Johanna Koponen
Matti Kankainen
Anu Surakka
Tuomas Salusjärvi
Petri Auvinen
Kirsi Savijoki
Tuula A Nyman
Nisse Kalkkinen
Soile Tynkkynen
Pekka Varmanen

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The growth phase during which probiotic bacteria are harvested and consumed can strongly influence their performance as health-promoting agents. In this study, global transcriptomic and proteomic changes were studied in the widely used probiotic Lactobacillus rhamnosus GG during growth in industrial-type whey medium under strictly defined bioreactor conditions. The expression of 636 genes (P ≤ 0.01) and 116 proteins (P < 0.05) changed significantly over time. Of the significantly differentially produced proteins, 61 were associated with alterations at the transcript level. The most remarkable growth phase-dependent changes occurred during the transition from the exponential to the stationary growth phase and were associated with the shift from glucose fermentation to galactose utilization and the transition from homolactic to mixed acid fermentation. Furthermore, several genes encoding proteins proposed to promote the survival and persistence of L. rhamnosus GG in the host and proteins that directly contribute to human health showed temporal changes in expression. Our results suggest that L. rhamnosus GG has a highly flexible and adaptable metabolism and that the growth stage during which bacterial cells are harvested and consumed should be taken into consideration to gain the maximal benefit from probiotic bacteria.

Indexed as

TranscriptomeBioreactorsCulture MediaLacticaseibacillus rhamnosusProteomeCulture MediaProteome

Identifiers

PMID21883975
PMCPMC3815411

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.