Evidence map›Paper›PMID 21881826›Full record

ArticleJournal of molecular neuroscience : MN2011

PSF suppresses tau exon 10 inclusion by interacting with a stem-loop structure downstream of exon 10.

Payal Ray, Amar Kar, Kazuo Fushimi, Necat Havlioglu, Xiaoping Chen, Jane Y Wu

Open access · greenAbstract read
In one paragraph

Article in Journal of molecular neuroscience : MN, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 47 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Alternative splicing in Alzheimer's disease.Aging clinical and experimental research · 2021
    Review
  10. Article
  11. Article
  12. Spectrum of tau pathologies in Huntington's disease.Laboratory investigation; a journal of technical methods and pathology · 2019
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Payal RayDepartment of Neurology, Lurie Cancer Center, Northwestern University Feinberg School of Medicine, Chicago, IL 60611, USA.
Amar Kar
Kazuo Fushimi
Necat Havlioglu
Xiaoping Chen
Jane Y Wu
UCLouvain Saint-Louis Brussels · BE

Funding

Theranostic Magnetic Nanostructures for the Molecular Imaging of CancerU54CA151880 · NCI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI OMARY, REED A. · 2010 to 2014
$11.5M
Mechanisms regulating tau alternative pre-mRNA splicingR01AG033004 · NIA · NORTHWESTERN UNIVERSITY AT CHICAGO · PI WU, JANE Y · 2011 to 2015
$1.5M
Searching for Genetic Modifiers of TDP-43 Proteinopathy Using an Animal ModelR56NS074763 · NINDS · NORTHWESTERN UNIVERSITY AT CHICAGO · PI WU, JANE Y · 2011 to 2011
$375k
NCI NIH HHS U54 CA151880NIA NIH HHS R01 AG033004NINDS NIH HHS R56 NS074763NINDS NIH HHS R56NS074763
6 · The paper itself

Abstract

Microtubule binding protein Tau has been implicated in a wide range of neurodegenerative disorders collectively classified as tauopathies. Exon 10 of the human tau gene, which codes for a microtubule binding repeat region, is alternatively spliced to form Tau protein isoforms containing either four or three microtubule binding repeats, Tau4R and Tau3R, respectively. The levels of different Tau splicing isoforms are fine-tuned by alternative splicing with the ratio of Tau4R/Tau3R maintained approximately at one in adult neurons. Mutations that disrupt tau exon 10 splicing regulation cause an imbalance of different tau splicing isoforms and have been associated with tauopathy. To search for factors interacting with tau pre-messenger RNA (pre-mRNA) and regulating tau exon 10 alternative splicing, we performed a yeast RNA-protein interaction screen and identified polypyrimidine tract binding protein associated splicing factor (PSF) as a candidate tau exon 10 splicing regulator. UV crosslinking experiments show that PSF binds to the stem-loop structure at the 5' splice site downstream of tau exon 10. This PSF-interacting RNA element is distinct from known PSF binding sites previously identified in other genes. Overexpression of PSF promotes tau exon 10 exclusion, whereas down-regulation of the endogenous PSF facilitates exon 10 inclusion. Immunostaining shows that PSF is expressed in the human brain regions affected by tauopathy. Our data reveal a new player in tau exon 10 alternative splicing regulation and uncover a previously unknown mechanism of PSF in regulating tau pre-mRNA splicing.

Indexed as

Alternative SplicingExonsNucleic Acid ConformationProtein IsoformsRNA, Messengertau ProteinsBrainHEK293 CellsHumansPTB-Associated Splicing FactorRNA-Binding ProteinsRNA Splice SitesTauopathiesTwo-Hybrid System TechniquesProtein IsoformsPTB-Associated Splicing FactorRNA-Binding ProteinsRNA, MessengerRNA Splice Sitestau Proteins

Identifiers

PMID21881826
PMCPMC3893066
OpenAlexW2060214635

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.