Evidence map›Paper›PMID 21878675›Full record

Trial reportBlood2011

The BCL11B tumor suppressor is mutated across the major molecular subtypes of T-cell acute lymphoblastic leukemia.

Alejandro Gutierrez, Alex Kentsis, Takaomi Sanda, Linda Holmfeldt, Shann-Ching Chen, Jianhua Zhang, Alexei Protopopov, Lynda Chin, Suzanne E Dahlberg, Donna S Neuberg and 9 more

Open access · bronzeAbstract readClinical TrialMulticenter Study
In one paragraph

Trial report in Blood, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 116 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
116citing papers in PubMed, 1 pooled it
14.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

116 citing papers in PubMed, 1 synthesis or guideline pooled it, 189 citations in OpenAlex.

  1. Pooled it
  2. Trial
  3. Trial
  4. Trial
  5. Review
  6. Article
  7. Review
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Dual role ofBlood science (Baltimore, Md.) · 2024
    Review
  15. Article
  16. Acute lymphoblastic leukaemia.Nature reviews. Disease primers · 2024
    Review
  17. Review
  18. Article
  19. Article
  20. Mutations atMolecular and cellular biology · 2024
    Article

56 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 7 institutions in 1 country.

Alejandro GutierrezDepartment of Pediatric Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.
Alex Kentsis
Takaomi Sanda
Linda Holmfeldt
Shann-Ching Chen
Jianhua Zhang
Alexei Protopopov
Lynda Chin
Suzanne E Dahlberg
Donna S Neuberg
Lewis B Silverman
Stuart S Winter
Stephen P Hunger
Stephen E Sallan
Shan Zha
Frederick W Alt
James R Downing
Charles G Mullighan
A Thomas Look
Boston Children's Hospital · USSt. Jude Children's Research Hospital · USDana-Farber Cancer Institute · USColumbia University Irving Medical Center · USHoward Hughes Medical Institute · USUniversity of Colorado Denver · USUniversity of New Mexico · US

Funding

COG FOREIGN ACCRUALU10CA098543 · NCI · NATIONAL CHILDHOOD CANCER FOUNDATION · PI ADAMSON, PETER C. · 2003 to 2013
$335.5M
Children's Oncology Group Statistics &Data Center GrantU10CA098413 · NCI · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI DEVIDAS, MEENAKSHI · 2003 to 2013
$67.5M
Zebrafish Screens for Genetic Modifiers and Human Application in T-ALLP01CA068484 · NCI · DANA-FARBER CANCER INSTITUTE · PI ORKIN, STUART H · 1995 to 2010
$31.9M
PEDIATRIC ONCOLOGY GROUP-OPERATIONS OFFICEU10CA030969 · NCI · WASHINGTON UNIVERSITY · PI REAMAN, GREGORY H · 1985 to 2002
$24.8M
The Molecular Function of D-cyclins in T-ALLP01CA109901 · NCI · DANA-FARBER CANCER INSTITUTE · PI YOUNG, RICHARD · 2004 to 2014
$19.6M
Support for Human Specimen Banking in NCI-Supported Cancer Clinical TrialsU24CA114766 · NCI · RESEARCH INST NATIONWIDE CHILDREN'S HOSP · PI RAMIREZ MILAN, NILSA DEL CARMEN · 2005 to 2014
$14.5M
PEDIATRIC ONCOLOGY GROUP STATISTICAL OFFICEU10CA029139 · NCI · UNIVERSITY OF FLORIDA · PI DEVIDAS, MEENAKSHI · 1985 to 2002
$7.3M
The role of ATM in the suppression of lymphoid malignancyR01CA158073 · NCI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI Shan Zha · 2011 to 2026
$5.7M
Zebrafish Chemical and Classical Genetics Approach to the Pathogenesis of T-ALLK08CA133103 · NCI · DANA-FARBER CANCER INST · PI GUTIERREZ, ALEJANDRO · 2008 to 2012
$705k
NCI NIH HHS 1K08CA133103NCI NIH HHS 1R01CA158073NCI NIH HHS 2P01CA109901NCI NIH HHS 5P01CA68484NCI NIH HHS CA114766NCI NIH HHS CA30969NCI NIH HHS CA98413NCI NIH HHS CA98543NCI NIH HHS K08 CA133103NCI NIH HHS L40 CA124083NCI NIH HHS P01 CA068484NCI NIH HHS P01 CA109901NCI NIH HHS R01 CA158073NCI NIH HHS U10 CA029139NCI NIH HHS U10 CA098413NCI NIH HHS U10 CA098543NCI NIH HHS U24 CA114766
6 · The paper itself

Abstract

The BCL11B transcription factor is required for normal T-cell development, and has recently been implicated in the pathogenesis of T-cell acute lymphoblastic leukemia (T-ALL) induced by TLX overexpression or Atm deficiency. To comprehensively assess the contribution of BCL11B inactivation to human T-ALL, we performed DNA copy number and sequencing analyses of T-ALL diagnostic specimens, revealing monoallelic BCL11B deletions or missense mutations in 9% (n = 10 of 117) of cases. Structural homology modeling revealed that several of the BCL11B mutations disrupted the structure of zinc finger domains required for this transcription factor to bind DNA. BCL11B haploinsufficiency occurred across each of the major molecular subtypes of T-ALL, including early T-cell precursor, HOXA-positive, LEF1-inactivated, and TAL1-positive subtypes, which have differentiation arrest at diverse stages of thymocyte development. Our findings provide compelling evidence that BCL11B is a haploinsufficient tumor suppressor that collaborates with all major T-ALL oncogenic lesions in human thymocyte transformation.

Indexed as

Gene DeletionHaploinsufficiencyMutation, MissenseFemaleHumansMalePrecursor T-Cell Lymphoblastic Leukemia-LymphomaRepressor ProteinsTumor Suppressor ProteinsZinc FingersBCL11B protein, humanRepressor ProteinsTumor Suppressor Proteins

Identifiers

PMID21878675
PMCPMC3204734
OpenAlexW2003913372

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.