Evidence map›Paper›PMID 21876734›Full record

ArticlePloS one2011

The 3-hydroxy-2-butanone pathway is required for Pectobacterium carotovorum pathogenesis.

Maria del Pilar Marquez-Villavicencio, Brooke Weber, R Andrews Witherell, David K Willis, Amy O Charkowski

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
7.4field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 80 citations in OpenAlex.

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  12. An OFrontiers in microbiology · 2023
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  16. Effects of NaturalMolecules (Basel, Switzerland) · 2022
    Article
  17. Isolation and Genome Analysis ofFrontiers in plant science · 2022
    Article
  18. Article
  19. C4 Bacterial Volatiles Improve Plant Health.Pathogens (Basel, Switzerland) · 2021
    Review
  20. Volatile Metabolic Markers for MonitoringJournal of microbiology and biotechnology · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Maria del Pilar Marquez-VillavicencioDepartment of Plant Pathology, University of Wisconsin-Madison, Madison, Wisconsin, United States of America.
Brooke Weber
R Andrews Witherell
David K Willis
Amy O Charkowski
University of Wisconsin–Madison · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Pectobacterium species are necrotrophic bacterial pathogens that cause soft rot diseases in potatoes and several other crops worldwide. Gene expression data identified Pectobacterium carotovorum subsp. carotovorum budB, which encodes the α-acetolactate synthase enzyme in the 2,3-butanediol pathway, as more highly expressed in potato tubers than potato stems. This pathway is of interest because volatiles produced by the 2,3-butanediol pathway have been shown to act as plant growth promoting molecules, insect attractants, and, in other bacterial species, affect virulence and fitness. Disruption of the 2,3-butanediol pathway reduced virulence of P. c. subsp. carotovorum WPP14 on potato tubers and impaired alkalinization of growth medium and potato tubers under anaerobic conditions. Alkalinization of the milieu via this pathway may aid in plant cell maceration since Pectobacterium pectate lyases are most active at alkaline pH.

Indexed as

Biosynthetic PathwaysAcetoinAlkaliesButylene GlycolsCulture MediaGene Expression ProfilingGene Expression Regulation, BacterialGenes, BacterialHydrogen-Ion ConcentrationMutationOperonPectobacterium carotovorumPlant StemsPlant TubersRNA, MessengerSolanum tuberosum2,3-butylene glycolAcetoinAlkaliesButylene GlycolsCulture MediaRNA, Messenger

Identifiers

PMID21876734
PMCPMC3158072
OpenAlexW2033797830

What OpenQuestion holds

Textmetadata
LicenceCC0
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.