Evidence map›Paper›PMID 21870122›Full record

ArticleMycopathologia2012

Identification of fibrinogen-binding proteins of Aspergillus fumigatus using proteomic approach.

Santosh Kumar Upadhyay, Poonam Gautam, Hrishikesh Pandit, Yogendra Singh, Seemi Farhat Basir, Taruna Madan

Abstract read
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Article in Mycopathologia, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.3field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 12 citations in OpenAlex.

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  4. Review
  5. Journal of fungi (Basel, Switzerland) · 2022
    Review
  6. Article
  7. Article
  8. Nutritional Heterogeneity AmongFrontiers in microbiology · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 2 countries.

Santosh Kumar UpadhyayInstitute of Genomics and Integrative Biology, Council for Scientific and Industrial Research, Delhi, India.
Poonam Gautam
Hrishikesh Pandit
Yogendra Singh
Seemi Farhat Basir
Taruna Madan
Council for Scientific and Industrial Research · ZAInstitute of Genomics and Integrative Biology · INJamia Millia Islamia · INNational Institute for Research in Reproductive Health · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Aspergillus fumigatus, the main etiological agent for various forms of human aspergillosis, gets access to the respiratory system of human host by inhalation of airborne conidia. These conidia possibly adhere to extracellular matrix (ECM) proteins. Among the ECM proteins involved in adherence, fibrinogen is thought to be crucial. Here, we studied whether A. fumigatus three-week culture filtrate (3wcf) proteins promote binding of A. fumigatus to ECM proteins and promote fungal growth. We observed that incubation of ECM with 3wcf proteins led to dose- and time-dependent increase in adherence of conidia to the ECM. In order to identify the catalogue of fibrinogen-binding A. fumigatus proteins, we carried out fibrinogen affinity blotting using two-dimensional gel electrophoresed 3wcf proteins. A total of 15 fibrinogen-binding protein spots corresponding to 7 unique proteins were identified in 3wcf using matrix-assisted laser desorption/ionization-time of flight (MALDI-TOF-TOF). Among these, 4 proteins, namely, beta-glucosidase, alpha-mannosidase, pectate lyase A and oryzin precursor were predicted to have cell wall or extracellular localization, whereas amidase family protein and two hypothetical proteins did not display the signal sequence. This study reports seven novel fibrinogen-binding proteins of A. fumigatus, some of which could be further explored for targeting the adhesion phenomenon as antifungal strategy.

Indexed as

Amino Acid SequenceAspergillosisAspergillus fumigatusCarrier ProteinsCell LineElectrophoresis, Gel, Two-DimensionalExtracellular Matrix ProteinsFibrinogenFungal ProteinsHumansMolecular Sequence DataProteomicsSpectrometry, Mass, Matrix-Assisted Laser Desorption-IonizationCarrier ProteinsExtracellular Matrix ProteinsFibrinogenFungal Proteins

Identifiers

PMID21870122
OpenAlexW2013342064

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.