Evidence map›Paper›PMID 21868125›Full record

ArticleEuropean journal of cell biology2011

Yeast ubiquitin ligase Rsp5 contains nuclear localization and export signals.

Piotr Cholbinski, Zaneta Jastrzebska, Monika Wysocka-Kapcinska, Danuta Plochocka, Agnieszka Gornicka, Anita K Hopper, Teresa Zoladek

Open access · greenAbstract read
In one paragraph

Article in European journal of cell biology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.3field-weighted citation impact, top 42% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 6 citations in OpenAlex.

  1. Review
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Piotr CholbinskiInstitute of Biochemistry and Biophysics, Polish Academy of Sciences, Warsaw, Poland.
Zaneta Jastrzebska
Monika Wysocka-Kapcinska
Danuta Plochocka
Agnieszka Gornicka
Anita K Hopper
Teresa Zoladek
Institute of Biochemistry and Biophysics, Polish Academy of Sciences · PLThe Ohio State University · US

Funding

YEAST GENES IN RNA PROCESSING &NUCLEUS/CYTOSOL EXCHANGER01GM027930 · NIGMS · PENNSYLVANIA STATE UNIV HERSHEY MED CTR · PI HOPPER, ANITA K · 1985 to 2014
$4.6M
NIGMS NIH HHS GM27930NIGMS NIH HHS R01 GM027930
6 · The paper itself

Abstract

The Rsp5 ubiquitin ligase regulates numerous cellular processes. Rsp5 is mainly localized to the cytoplasm but nuclear localization was also reported. A potential nuclear export signal was tested for activity by using a GFP(2) reporter. The 687-LIGGIAEIDI-696 sequence located in the Hect domain was identified as a nuclear export signal active in a Crm1-dependent manner, and its importance for the localization of Rsp5 was documented by using fluorescence microscopy and a lacZ-based reporter system. Analysis of the cellular location of other Rsp5 fragments fused with GFP(2) indicated two independent potential nuclear localization signals, both located in the Hect domain. We also uncovered Rsp5 fragments that are important to targeting/tethering Rsp5 to various regions in the cytoplasm. The presented data indicate that Rsp5 ligase is a shuttling protein whose distribution within the cytoplasm and partitioning between cytoplasmic and nuclear locations is determined by a balance between the actions of several targeting sequences and domains.

Indexed as

Protein TransportAmino Acid SequenceCell NucleusEndosomal Sorting Complexes Required for TransportExportin 1 ProteinGene Knockout TechniquesGenes, ReporterGreen Fluorescent ProteinsKaryopherinsMolecular Sequence DataNuclear Export SignalsNuclear Localization SignalsPeptide FragmentsProtein Structure, TertiaryReceptors, Cytoplasmic and NuclearRecombinant ProteinsEndosomal Sorting Complexes Required for TransportExportin 1 ProteinGreen Fluorescent ProteinsKaryopherinsNuclear Export SignalsNuclear Localization SignalsPeptide FragmentsReceptors, Cytoplasmic and NuclearRecombinant ProteinsRSP5 protein, S cerevisiaeSaccharomyces cerevisiae ProteinsUbiquitin-Protein Ligase Complexes

Identifiers

PMID21868125
PMCPMC3167943
OpenAlexW2046826523

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.