Evidence map›Paper›PMID 21865168›Full record

ArticleThe Journal of biological chemistry2011

New N-acetyltransferase fold in the structure and mechanism of the phosphonate biosynthetic enzyme FrbF.

Brian Bae, Ryan E Cobb, Matthew A DeSieno, Huimin Zhao, Satish K Nair

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.3field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
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  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Brian BaeDepartment of Biochemistry, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801.
Ryan E CobbDepartment of Chemical and Biomolecular Engineering, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801; Department of Institute for Genomic Biology, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801.
Matthew A DeSienoDepartment of Chemical and Biomolecular Engineering, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801; Department of Institute for Genomic Biology, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801.
Huimin ZhaoDepartment of Biochemistry, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801; Department of Chemical and Biomolecular Engineering, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801; Department of Institute for Genomic Biology, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801. Electronic address: zhao5@illinois.edu.
Satish K NairDepartment of Biochemistry, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801; Department of Institute for Genomic Biology, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801. Electronic address: snair@illinois.edu.
University of Illinois Urbana-Champaign · US

Funding

Structural Elucidation and Biosynthesis P01GM077596 · NIGMS · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI METCALF, WILLIAM W · 2007 to 2016
$15.3M
Training Program in Chemistry-Interface with BiologyT32GM070421 · NIGMS · UNIVERSITY OF ILLINOIS URBANA-CHAMPAIGN · PI HERGENROTHER, PAUL · 2005 to 2019
$5.4M
NIGMS NIH HHS 5 T32 GM070421NIGMS NIH HHS P01 GM077596NIGMS NIH HHS T32 GM070421
6 · The paper itself

Abstract

The enzyme FrbF from Streptomyces rubellomurinus has attracted significant attention due to its role in the biosynthesis of the antimalarial phosphonate FR-900098. The enzyme catalyzes acetyl transfer onto the hydroxamate of the FR-900098 precursors cytidine 5'-monophosphate-3-aminopropylphosphonate and cytidine 5'-monophosphate-N-hydroxy-3-aminopropylphosphonate. Despite the established function as a bona fide N-acetyltransferase, FrbF shows no sequence similarity to any member of the GCN5-like N-acetyltransferase (GNAT) superfamily. Here, we present the 2.0 Å resolution crystal structure of FrbF in complex with acetyl-CoA, which demonstrates a unique architecture that is distinct from those of canonical GNAT-like acetyltransferases. We also utilized the co-crystal structure to guide structure-function studies that identified the roles of putative active site residues in the acetyltransferase mechanism. The combined biochemical and structural analyses of FrbF provide insights into this previously uncharacterized family of N-acetyltransferases and also provide a molecular framework toward the production of novel N-acyl derivatives of FR-900098.

Indexed as

Protein FoldingAcetyltransferasesBacterial ProteinsCatalytic DomainCrystallography, X-RayFosfomycinOrganophosphonatesProtein Structure, TertiaryStreptomycesStructure-Activity RelationshipAcetyltransferasesBacterial ProteinsFosfomycinfosmidomycinOrganophosphonates

Identifiers

PMID21865168
PMCPMC3195558
OpenAlexW2059283641

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.