Evidence map›Paper›PMID 21865161›Full record

ArticleThe Journal of biological chemistry2011

Placenta-specific expression of the interleukin-2 (IL-2) receptor β subunit from an endogenous retroviral promoter.

Carla J Cohen, Rita Rebollo, Sonja Babovic, Elizabeth L Dai, Wendy P Robinson, Dixie L Mager

Abstract read
In one paragraph

Article in The Journal of biological chemistry, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed.

  1. Review
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  4. Article
  5. Article
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  8. Review
  9. Article
  10. Interleukin-15 in Outcomes of Pregnancy.International journal of molecular sciences · 2021
    Review
  11. Review
  12. Review
  13. Article
  14. Review
  15. Review
  16. Article
  17. Review
  18. Article
  19. Article
  20. The human placental methylome.Cold Spring Harbor perspectives in medicine · 2015
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Carla J CohenTerry Fox Laboratory, BC Cancer Agency, Vancouver, British Columbia V5Z 1L3.
Rita RebolloTerry Fox Laboratory, BC Cancer Agency, Vancouver, British Columbia V5Z 1L3.
Sonja BabovicTerry Fox Laboratory, BC Cancer Agency, Vancouver, British Columbia V5Z 1L3.
Elizabeth L DaiTerry Fox Laboratory, BC Cancer Agency, Vancouver, British Columbia V5Z 1L3.
Wendy P RobinsonDepartment of Medical Genetics, University of British Columbia, British Columbia V6T 1Z4; Child and Family Research Institute, Vancouver, British Columbia V5Z 4H4, Canada.
Dixie L MagerTerry Fox Laboratory, BC Cancer Agency, Vancouver, British Columbia V5Z 1L3; Department of Medical Genetics, University of British Columbia, British Columbia V6T 1Z4. Electronic address: dmager@bccrc.ca.

Funding

Canadian Institutes of Health Research
6 · The paper itself

Abstract

The long terminal repeat (LTR) sequences of endogenous retroviruses and retroelements contain promoter elements and are known to form chimeric transcripts with nearby cellular genes. Here we show that an LTR of the THE1D retroelement family has been domesticated as an alternative promoter of human IL2RB, the gene encoding the β subunit of the IL-2 receptor. The LTR promoter confers expression specifically in the placental trophoblast as opposed to its native transcription in the hematopoietic system. Rather than sequence-specific determinants, DNA methylation was found to regulate transcription initiation and splicing efficiency in a tissue-specific manner. Furthermore, we detected the cytoplasmic signaling domain of the IL-2Rβ protein in the placenta, suggesting that IL-2Rβ undergoes preferential proteolytic cleavage in this tissue. These findings implicate novel functions for this cytokine receptor subunit in the villous trophoblast and reveal an intriguing example of ancient LTR exaptation to drive tissue-specific gene expression.

Indexed as

DNA MethylationEndogenous RetrovirusesFemaleHumansInterleukin-2 Receptor beta SubunitOrgan SpecificityPregnancy ProteinsPromoter Regions, GeneticTerminal Repeat SequencesTrophoblastsIL2RB protein, humanInterleukin-2 Receptor beta SubunitPregnancy Proteins

Identifiers

PMID21865161
PMCPMC3195601

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.