Evidence map›Paper›PMID 21861759›Full record

ArticleStem cells and development2012

A model of early human embryonic stem cell differentiation reveals inter- and intracellular changes on transition to squamous epithelium.

Vasiliy Galat, Sergey Malchenko, Yekaterina Galat, Alex Ishkin, Yuri Nikolsky, Steven T Kosak, Bento Marcelo Soares, Philip Iannaccone, John D Crispino, Mary J C Hendrix

Abstract read
In one paragraph

Article in Stem cells and development, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Vasiliy GalatDevelopmental Biology Program, iPS and Human Stem Cell Core Facility, Children's Memorial Research Center, Northwestern University, Feinberg School of Medicine, Chicago, Illinois 60614-3394, USA. v-galat@northwestern.edu
Sergey Malchenko
Yekaterina Galat
Alex Ishkin
Yuri Nikolsky
Steven T Kosak
Bento Marcelo Soares
Philip Iannaccone
John D Crispino
Mary J C Hendrix

Funding

Epigenetic Effect of the Microenvironment on Stem Cell Plasticity and FunctionR01CA121205 · NCI · LURIE CHILDREN'S HOSPITAL OF CHICAGO · PI HENDRIX, MARY J.C. · 2007 to 2011
$2.1M
Identification of Altered Molecular Signature of Down Syndrome iPS CellsRC1HL100168 · NHLBI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI CRISPINO, JOHN D, GALAT, VASIL V · 2009 to 2010
$999k
Integrating cell sorting and tissue shaping mechanisms during cornea maturationR21EY020946 · NEI · LURIE CHILDREN'S HOSPITAL OF CHICAGO · PI IANNACCONE, PHILIP M · 2010 to 2010
$262k
NCI NIH HHS CA121205NEI NIH HHS EY020946NHLBI NIH HHS RC1HL100168
6 · The paper itself

Abstract

The molecular events leading to human embryonic stem cell (hESC) differentiation are the subject of considerable scrutiny. Here, we characterize an in vitro model that permits analysis of the earliest steps in the transition of hESC colonies to squamous epithelium on basic fibroblast growth factor withdrawal. A set of markers (GSC, CK18, Gata4, Eomes, and Sox17) point to a mesendodermal nature of the epithelial cells with subsequent commitment to definitive endoderm (Sox17, Cdx2, nestin, and Islet1). We assayed alterations in the transcriptome in parallel with the distribution of immunohistochemical markers. Our results indicate that the alterations of tight junctions in pluripotent culture precede the beginning of differentiation. We defined this cell population as "specified," as it is committed toward differentiation. The transitional zone between "specified" pluripotent and differentiated cells displays significant up-regulation of keratin-18 (CK18) along with a decrease in the functional activity of gap junctions and the down-regulation of 2 gap junction proteins, connexin 43 (Cx43) and connexin 45 (Cx45), which is coincidental with substantial elevation of intracellular Ca2+ levels. These findings reveal a set of cellular changes that may represent the earliest markers of in vitro hESC transition to an epithelial phenotype, before the induction of gene expression networks that guide hESC differentiation. Moreover, we hypothesize that these events may be common during the primary steps of hESC commitment to functionally varied epithelial tissue derivatives of different embryological origins.

Indexed as

Cell DifferentiationModels, BiologicalBiomarkersCell LineCell LineageCluster AnalysisEmbryonic Stem CellsEpitheliumExtracellular SpaceGene Expression ProfilingGene Expression Regulation, DevelopmentalGiant CellsHumansIntracellular SpaceMembrane ProteinsPhosphoproteinsBiomarkersMembrane ProteinsPhosphoproteinsTJP1 protein, humanZonula Occludens-1 Protein

Identifiers

PMID21861759
PMCPMC3353739

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.