Evidence map›Paper›PMID 21858178›Full record

ArticlePloS one2011

Ectopic pregnancy as a model to identify endometrial genes and signaling pathways important in decidualization and regulated by local trophoblast.

W Colin Duncan, Julie L V Shaw, Stewart Burgess, Sarah E McDonald, Hilary O D Critchley, Andrew W Horne

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 47 citations in OpenAlex.

  1. Article
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  4. The Effect of AlteredInternational journal of fertility & sterility · 2023
    Article
  5. Article
  6. Article
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  9. Evidence for shared molecular pathways of dysregulated decidualization in preeclampsia and endometrial disorders revealed by microarray data integration.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2019
    Article
  10. Article
  11. Article
  12. Reproducible Bioconductor workflows using browser-based interactive notebooks and containers.Journal of the American Medical Informatics Association : JAMIA · 2018
    Article
  13. Review
  14. Update of Wnt signaling in implantation and decidualization.Reproductive medicine and biology · 2016
    Review
  15. Review
  16. Article
  17. Article
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  19. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

W Colin DuncanMRC Centre for Reproductive Health, The University of Edinburgh, Edinburgh, Midlothian, United Kingdom.
Julie L V Shaw
Stewart Burgess
Sarah E McDonald
Hilary O D Critchley
Andrew W Horne
University of Edinburgh · GBMRC Centre for Reproductive Health · GBMoredun Research Institute · GB

Funding

Chief Scientist Office SCD/02Medical Research Council G0500717Medical Research Council G0600048Medical Research Council G0600048(80179)Medical Research Council G0802808Medical Research Council G1002033
6 · The paper itself

Abstract

The endometrium in early pregnancy undergoes decidualization and functional changes induced by local trophoblast, which are not fully understood. We hypothesized that endometrium from tubal ectopic pregnancy (EP) could be interrogated to identify novel genes and pathways involved in these processes. Gestation-matched endometrium was collected from women with EP (n = 11) and intrauterine pregnancies (IUP) (n = 13). RNA was extracted from the tissue. In addition, tissues were prepared for histological analysis for degree of decidualization. We compared a) the samples from EP that were decidualized (n = 6) with non-decidualized samples (n = 5), and b) the decidualized EP (n = 6) with decidualization-matched IUP (n = 6) samples using an Affymetrix gene array platform, with Ingenuity Pathway Analysis, combined with quantitative RT-PCR. Expression of PRL and IGFBP1 was used to confirm the degree of decidualization in each group. There were no differences in PRL or IGFBP1 expression in the decidualization-matched samples but a marked reduction (P<0.001) in the non-decidualized samples. Decidualization was associated with increased expression of 428 genes including SCARA5 (181-fold), DKK1 (71-fold) and PROK1 (32-fold), and decreased expression of 230 genes including MMP-7 (35-fold) and SFRP4 (21-fold). The top canonical pathways associated with these differentially expressed genes were Natural Killer Cell and Wnt/b-Catenin signaling. Local trophoblast was associated with much less alteration of endometrial gene expression with an increase in 56 genes, including CSH1 (8-fold), and a reduction in 29 genes including CRISP3 (8-fold). The top associated canonical pathway was Antigen Presentation. The study of endometrium from tubal EP may promote novel insights into genes involved in decidualization and those influenced by factors from neighboring trophoblast. This has afforded unique information not highlighted by previous studies and adds to our understanding of the endometrium in early pregnancy.

Indexed as

Gene Expression Regulation, DevelopmentalCell LineDeciduaEndometriumFemaleGastrointestinal HormonesGene Expression ProfilingGene Regulatory NetworksHumansIntercellular Signaling Peptides and ProteinsMatrix Metalloproteinase 7Models, GeneticOligonucleotide Array Sequence AnalysisPregnancyPregnancy, EctopicProto-Oncogene ProteinsDKK1 protein, humanGastrointestinal HormonesIntercellular Signaling Peptides and ProteinsMatrix Metalloproteinase 7MMP7 protein, humanPROK1 protein, humanProto-Oncogene ProteinsSCARA5 protein, humanScavenger Receptors, Class ASecreted Frizzled-Related ProteinsSFRP4 protein, humanVascular Endothelial Growth Factor, Endocrine-Gland-Derived

Identifiers

PMID21858178
PMCPMC3157392
OpenAlexW1988593472

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.