Evidence map›Paper›PMID 21858152›Full record

ArticlePloS one2011

The glycan shield of HIV is predominantly oligomannose independently of production system or viral clade.

Camille Bonomelli, Katie J Doores, D Cameron Dunlop, Victoria Thaney, Raymond A Dwek, Dennis R Burton, Max Crispin, Christopher N Scanlan

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 165 papers.

0numbers the graph read from it
0cells of the map it votes in
165citing papers in PubMed
7.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

165 citing papers in PubMed, 234 citations in OpenAlex.

  1. Structural Insights Into ManAdvanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
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105 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Camille BonomelliDepartment of Biochemistry, Oxford Glycobiology Institute, University of Oxford, Oxford, United Kingdom.
Katie J Doores
D Cameron Dunlop
Victoria Thaney
Raymond A Dwek
Dennis R Burton
Max Crispin
Christopher N Scanlan
University of Oxford · GBInternational AIDS Vaccine Initiative · USRagon Institute of MGH, MIT and Harvard · US

Funding

HUMAN ANTIBODIES TO HIV-1 BY REPERTOIRE CLONINGR01AI033292 · NIAID · SCRIPPS RESEARCH INSTITUTE, THE · PI BURTON, DENNIS R. · 1992 to 2013
$5.9M
NIAID NIH HHS R01 AI033292
6 · The paper itself

Abstract

The N-linked oligomannose glycans of HIV gp120 are a target for both microbicide and vaccine design. The extent of cross-clade conservation of HIV oligomannose glycans is therefore a critical consideration for the development of HIV prophylaxes. We measured the oligomannose content of virion-associated gp120 from primary virus from PBMCs for a range of viral isolates and showed cross-clade elevation (62-79%) of these glycans relative to recombinant, monomeric gp120 (∼30%). We also confirmed that pseudoviral production systems can give rise to notably elevated gp120 oligomannose levels (∼98%), compared to gp120 derived from a single-plasmid viral system using the HIV(LAI) backbone (56%). This study highlights differences in glycosylation between virion-associated and recombinant gp120.

Indexed as

Cells, CulturedGlycosylationHEK293 CellsHIV-1HIV Envelope Protein gp120HumansMannoseOligosaccharidesPolysaccharidesRecombinant ProteinsSpectrometry, Mass, Matrix-Assisted Laser Desorption-IonizationVirionHIV Envelope Protein gp120MannoseOligosaccharidesPolysaccharidesRecombinant Proteins

Identifiers

PMID21858152
PMCPMC3156772
OpenAlexW2000475809

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.