Evidence map›Paper›PMID 21858045›Full record

ArticlePloS one2011

Transcriptomic analysis brings new insight into the biological role of the prion protein during mouse embryogenesis.

Manal Khalifé, Rachel Young, Bruno Passet, Sophie Halliez, Marthe Vilotte, Florence Jaffrezic, Sylvain Marthey, Vincent Béringue, Daniel Vaiman, Fabienne Le Provost and 2 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.7field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 27 citations in OpenAlex.

  1. Article
  2. Article
  3. Prion Strains and Transmission Barrier Phenomena.Pathogens (Basel, Switzerland) · 2018
    Review
  4. Article
  5. Article
  6. Article
  7. Review
  8. To develop with or without the prion protein.Frontiers in cell and developmental biology · 2014
    Review
  9. The prion protein family: a view from the placenta.Frontiers in cell and developmental biology · 2014
    Review
  10. PrP(C) from stem cells to cancer.Frontiers in cell and developmental biology · 2014
    Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Manal KhaliféINRA, UMR1313, Génétique Animale et Biologie Intégrative, INRA, Jouy-en-Josas, France.
Rachel Young
Bruno Passet
Sophie Halliez
Marthe Vilotte
Florence Jaffrezic
Sylvain Marthey
Vincent Béringue
Daniel Vaiman
Fabienne Le Provost
Hubert Laude
Jean-Luc Vilotte
Génétique Animale et Biologie Intégrative · FRVirologie et Immunologie Moléculaires · FRInserm · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The biological function of the Prion protein remains largely unknown but recent data revealed its implication in early zebrafish and mammalian embryogenesis. To gain further insight into its biological function, comparative transcriptomic analysis between FVB/N and FVB/N Prnp knockout mice was performed at early embryonic stages. RNAseq analysis revealed the differential expression of 73 and 263 genes at E6.5 and E7.5, respectively. The related metabolic pathways identified in this analysis partially overlap with those described in PrP1 and PrP2 knockdown zebrafish embryos and prion-infected mammalian brains and emphasize a potentially important role for the PrP family genes in early developmental processes.

Indexed as

Gene Expression Regulation, DevelopmentalTranscriptomeAnimalsEmbryo, MammalianEmbryonic DevelopmentEmbryo, NonmammalianGene Expression ProfilingGene Knockdown TechniquesGene Regulatory NetworksImmunohistochemistryMiceMice, KnockoutPrionsProtein IsoformsReverse Transcriptase Polymerase Chain ReactionZebrafishPrionsProtein IsoformsZebrafish Proteins

Identifiers

PMID21858045
PMCPMC3156130
OpenAlexW1980429576

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.