Evidence map›Paper›PMID 21857981›Full record

ArticlePloS one2011

The complete mitochondrial genome of the Asiatic cavity-nesting honeybee Apis cerana (Hymenoptera: Apidae).

Hong-Wei Tan, Guo-Hua Liu, Xia Dong, Rui-Qing Lin, Hui-Qun Song, Si-Yang Huang, Zi-Guo Yuan, Guang-Hui Zhao, Xing-Quan Zhu

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
7.5field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 64 citations in OpenAlex.

  1. Article
  2. The complete mitogenome ofMitochondrial DNA. Part B, Resources · 2025
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  3. The complete mitochondrial genome ofFrontiers in genetics · 2025
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  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. The mitochondrial genome ofMitochondrial DNA. Part B, Resources · 2019
    Article
  13. Article
  14. The complete mitochondrial genome of the cavity-nesting honeybee,Mitochondrial DNA. Part B, Resources · 2017
    Article
  15. The complete mitochondrial genome of the cavity-nesting honeybee,Mitochondrial DNA. Part B, Resources · 2017
    Article
  16. Complete mitochondrial genome of the Japanese bumblebee,Mitochondrial DNA. Part B, Resources · 2016
    Article
  17. The complete mitochondrial genome of the Japanese honeybee,Mitochondrial DNA. Part B, Resources · 2016
    Article
  18. Article
  19. Article
  20. Patterns of positive selection in seven ant genomes.Molecular biology and evolution · 2014
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 1 country.

Hong-Wei TanState Key Laboratory of Veterinary Etiological Biology, Lanzhou Veterinary Research Institute, Chinese Academy of Agricultural Sciences, Lanzhou, Gansu Province, China.
Guo-Hua Liu
Xia Dong
Rui-Qing Lin
Hui-Qun Song
Si-Yang Huang
Zi-Guo Yuan
Guang-Hui Zhao
Xing-Quan Zhu
Chinese Academy of Agricultural Sciences · CNYunnan Agricultural University · CNLanzhou Veterinary Research Institute · CNNorthwest A&F University · CNSouth China Agricultural University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In the present study, we determined the complete mitochondrial DNA (mtDNA) sequence of Apis cerana, the Asiatic cavity-nesting honeybee. We present here an analysis of features of its gene content and genome organization in comparison with Apis mellifera to assess the variation within the genus Apis and among main groups of Hymenoptera. The size of the entire mt genome of A. cerana is 15,895 bp, containing 2 ribosomal RNA genes, 13 protein-coding genes, 22 transfer RNA (tRNA) genes and one control region. These genes are transcribed from both strands and have a nucleotide composition high in A and T. The contents of A+T of the complete genomes are 83.96% for A. cerana. The AT bias had a significant effect on both the codon usage pattern and amino acid composition of proteins. There are a total of 3672 codons in all 13 protein-coding genes, excluding termination codons. The most frequently used amino acid is Leu (15.52%), followed by Ile (12.85%), Phe (10.10%), Ser (9.15%) and Met (8.96%). Intergenic regions in the mt genome of A. cerana are 705 bp in total. The order and orientation of the gene arrangement pattern is identical to that of A. mellifera, except for the position of the tRNA-Ser(AGN) gene. Phylogenetic analyses using concatenated amino acid sequences of 13 protein-coding genes, with three different computational algorithms (NJ, MP and ML), all revealed two distinct groups with high statistical support, indicating that A. cerana and A. mellifera are two separate species, consistent with results of previous morphological and molecular studies. The complete mtDNA sequence of A. cerana provides additional genetic markers for studying population genetics, systematics and phylogeographics of honeybees.

Indexed as

AnimalsBase SequenceBeesDNA, CircularDNA, MitochondrialGene OrderGenes, InsectGenes, MitochondrialGenome, MitochondrialInsect ProteinsMitochondrial ProteinsMolecular Sequence DataPhylogenyRNA, RibosomalRNA, TransferSequence Analysis, DNADNA, CircularDNA, MitochondrialInsect ProteinsMitochondrial ProteinsRNA, RibosomalRNA, Transfer

Identifiers

PMID21857981
PMCPMC3155526
OpenAlexW2095547650

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.