Evidence map›Paper›PMID 21854049›Full record

ArticleAnalytical chemistry2011

Synthesis and characterization of SIRT6 protein coated magnetic beads: identification of a novel inhibitor of SIRT6 deacetylase from medicinal plant extracts.

M Yasuda, D R Wilson, S D Fugmann, R Moaddel

Open access · greenAbstract read
In one paragraph

Article in Analytical chemistry, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 85 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Review
  5. Sirtuins as Players in the Signal Transduction ofInternational journal of molecular sciences · 2024
    Review
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Screening of SIRT6 inhibitors and activators: A novel activator has an impact on breast cancer cells.Biomedicine & pharmacotherapy = Biomedecine & pharmacotherapie · 2021
    Article
  13. Article
  14. Review
  15. Review
  16. Review
  17. Natural Products as Modulators of Sirtuins.Molecules (Basel, Switzerland) · 2020
    Review
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 1 country.

M YasudaBiomedical Research Center, National Institute on Aging, National Institutes of Health, 251 Bayview Boulevard, Suite 100, Baltimore, Maryland 21224-6825, USA.
D R Wilson
S D Fugmann
R Moaddel
National Institutes of Health · USInstitute on Aging · USNational Institute on Aging · US

Funding

The role of SIRT6 in transcription and the maintenance of genomic integrityZIAAG000389 · NIA · NATIONAL INSTITUTE ON AGING · PI SEN, RANJAN · 2009 to 2013
$1.1M
Intramural NIH HHS Z99 AG999999NIA NIH HHS R99 AG999999
6 · The paper itself

Abstract

SIRT6 is a histone deacetylase that has been proposed as a potential therapeutic target for metabolic disorders and the prevention of age-associated diseases. Thus, the identification of compounds that modulate SIRT6 activity could be of great therapeutic importance. The aim of this study was to develop a screening method for the identification of novel modulators of SIRT6 from a natural plant extract. We immobilized SIRT6 onto the surface of magnetic beads, and assessed SIRT6 enzymatic activity on synthetic acetylated histone tails (H3K9Ac) by measuring products of the deacetylation process. The SIRT6 coated magnetic beads were then suspended in fenugreek seed extract (Trigonella foenum-graecum) as a bait to identify active ligands that suppress SIRT6 activity. While the entire extract also inhibited SIRT6 activity in a cell-based assay, the inhibitory effect of two flavonoids from this extract, quercetin and vitexin, was only detected in vitro. This is the first report on the use of protein-coated magnetic beads for the identification of an active ligand from a botanical matrix, and it sets the basis for the de novo identification of SIRT6 modulators from complex biological mixtures.

Indexed as

AnimalsBiocatalysisCells, CulturedChickensDose-Response Relationship, DrugDrug Evaluation, PreclinicalEnzyme InhibitorsEnzymes, ImmobilizedHistone DeacetylasesMagnetsMass SpectrometryPlant ExtractsRecombinant Fusion ProteinsSeedsStructure-Activity RelationshipSurface PropertiesEnzyme InhibitorsEnzymes, ImmobilizedHistone DeacetylasesPlant ExtractsRecombinant Fusion Proteins

Identifiers

PMID21854049
PMCPMC3197717
OpenAlexW2063688418

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.