Evidence map›Paper›PMID 21853086›Full record

ArticlePloS one2011

The nucleotide exchange factor Ric-8A is a chaperone for the conformationally dynamic nucleotide-free state of Gαi1.

Celestine J Thomas, Klára Briknarová, Jonathan K Hilmer, Navid Movahed, Brian Bothner, John P Sumida, Gregory G Tall, Stephen R Sprang

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 53 citations in OpenAlex.

  1. Article
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  7. Ric-8A, a GEF, and a Chaperone for G Protein α-Subunits: Evidence for the Two-Faced Interface.BioEssays : news and reviews in molecular, cellular and developmental biology · 2020
    Article
  8. Article
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  12. Atypical activation of the G protein GαThe Journal of biological chemistry · 2018
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  13. Article
  14. Specific inhibition of GPCR-independent G protein signaling by a rationally engineered protein.Proceedings of the National Academy of Sciences of the United States of America · 2017
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  15. Article
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  19. Article
  20. Gα13 Stimulates the Tyrosine Phosphorylation of Ric-8A.Journal of molecular signaling · 2015
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

Celestine J ThomasCenter for Biomolecular Structure and Dynamics, The University of Montana, Missoula, Montana, United States of America.
Klára Briknarová
Jonathan K Hilmer
Navid Movahed
Brian Bothner
John P Sumida
Gregory G Tall
Stephen R Sprang
Montana State University · USUniversity of Montana · USUniversity of Rochester Medical Center · USUniversity of Washington · US

Funding

MT INBRE RESEARCH COREP20RR016455 · NCRR · MONTANA STATE UNIVERSITY - BOZEMAN · PI HARMSEN, ALLEN G · 2001 to 2011
$34.4M
VIRUSES: FROM PARTICLES TO PROTEOMICSP20RR020185 · NCRR · MONTANA STATE UNIVERSITY - BOZEMAN · PI MEISSNER, NICOLE · 2004 to 2011
$17.0M
SYSTEMS BIOLOGY OF HOST-PATHOGEN INTERACTIONSP20RR024237 · NCRR · MONTANA STATE UNIVERSITY - BOZEMAN · PI GAUSS, KATHERINE A. · 2008 to 2011
$8.1M
Regulation of Heterotrimeric G proteins by non-receptor activatorsR01GM088242 · NIGMS · UNIVERSITY OF ROCHESTER · PI TALL, GREGORY GORDON · 2009 to 2022
$4.2M
X RAY STRUCTURE DETERMINATION OF G PROTEIN A SUBUNITSR01DK046371 · NIDDK · UT SOUTHWESTERN MEDICAL CENTER · PI SPRANG, STEPHEN R. · 1994 to 2007
$2.1M
Structural Analysis of G Protein Regulatory MechanismsR56DK046371 · NIDDK · UNIVERSITY OF MONTANA · PI SPRANG, STEPHEN R · 2009 to 2009
$133k
NCRR NIH HHS P20 RR016455NCRR NIH HHS P20 RR020185NCRR NIH HHS P20 RR024237NCRR NIH HHS RR020185NCRR NIH HHS RR16455NCRR NIH HHS RR24237NIDDK NIH HHS DK46371NIDDK NIH HHS R01 DK046371NIDDK NIH HHS R56 DK046371NIGMS NIH HHS GM088242NIGMS NIH HHS R01 GM088242
6 · The paper itself

Abstract

Heterotrimeric G protein α subunits are activated upon exchange of GDP for GTP at the nucleotide binding site of Gα, catalyzed by guanine nucleotide exchange factors (GEFs). In addition to transmembrane G protein-coupled receptors (GPCRs), which act on G protein heterotrimers, members of the family cytosolic proteins typified by mammalian Ric-8A are GEFs for Gi/q/12/13-class Gα subunits. Ric-8A binds to Gα•GDP, resulting in the release of GDP. The Ric-8A complex with nucleotide-free Gαi1 is stable, but dissociates upon binding of GTP to Gαi1. To gain insight into the mechanism of Ric-8A-catalyzed GDP release from Gαi1, experiments were conducted to characterize the physical state of nucleotide-free Gαi1 (hereafter referred to as Gαi1[ ]) in solution, both as a monomeric species, and in the complex with Ric-8A. We found that Ric-8A-bound, nucleotide-free Gαi1 is more accessible to trypsinolysis than Gαi1•GDP, but less so than Gαi1[ ] alone. The TROSY-HSQC spectrum of [(15)N]Gαi1[ ] bound to Ric-8A shows considerable loss of peak intensity relative to that of [(15)N]Gαi1•GDP. Hydrogen-deuterium exchange in Gαi1[ ] bound to Ric-8A is 1.5-fold more extensive than in Gαi1•GDP. Differential scanning calorimetry shows that both Ric-8A and Gαi1•GDP undergo cooperative, irreversible unfolding transitions at 47° and 52°, respectively, while nucleotide-free Gαi1 shows a broad, weak transition near 35°. The unfolding transition for Ric-8A:Gαi1[ ] is complex, with a broad transition that peaks at 50°, suggesting that both Ric-8A and Gαi1[ ] are stabilized within the complex, relative to their respective free states. The C-terminus of Gαi1 is shown to be a critical binding element for Ric-8A, as is also the case for GPCRs, suggesting that the two types of GEF might promote nucleotide exchange by similar mechanisms, by acting as chaperones for the unstable and dynamic nucleotide-free state of Gα.

Indexed as

AnimalsDeuterium Exchange MeasurementGTP-Binding Protein alpha Subunits, Gi-GoGuanine Nucleotide Exchange FactorsGuanosine 5'-O-(3-Thiotriphosphate)Guanosine DiphosphateMagnetic Resonance SpectroscopyMolecular ChaperonesNuclear ProteinsNucleotidesProtein BindingProtein DenaturationProtein StabilityProtein Structure, SecondaryProtonsRatsGnai1 protein, ratGTP-Binding Protein alpha Subunits, Gi-GoGuanine Nucleotide Exchange FactorsGuanosine 5'-O-(3-Thiotriphosphate)Guanosine DiphosphateMolecular ChaperonesNuclear ProteinsNucleotidesProtonsRic8a protein, ratTrypsin

Identifiers

PMID21853086
PMCPMC3154933
OpenAlexW1969451894

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.