Evidence map›Paper›PMID 21852532›Full record

ArticleGenes & development2011

LRH-1 and PTF1-L coregulate an exocrine pancreas-specific transcriptional network for digestive function.

Sam R Holmstrom, Tye Deering, Galvin H Swift, Frank J Poelwijk, David J Mangelsdorf, Steven A Kliewer, Raymond J MacDonald

Open access · diamondAbstract read
In one paragraph

Article in Genes & development, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 57 papers.

0numbers the graph read from it
0cells of the map it votes in
57citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

57 citing papers in PubMed, 100 citations in OpenAlex.

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  16. Frontiers in cell and developmental biology · 2021
    Article
  17. Article
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  19. Transcription factor Ptf1a in development, diseases and reprogramming.Cellular and molecular life sciences : CMLS · 2019
    Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Sam R HolmstromHoward Hughes Medical Institute, University of Texas Southwestern Medical Center, Dallas, Texas 75390, USA.
Tye Deering
Galvin H Swift
Frank J Poelwijk
David J Mangelsdorf
Steven A Kliewer
Raymond J MacDonald
The University of Texas Southwestern Medical Center · USCenter for Systems Biology · US

Funding

Transcriptional Regulators of the Exocrine Pancreatic PhenotypeR01DK061220 · NIDDK · UT SOUTHWESTERN MEDICAL CENTER · PI MACDONALD, RAYMOND J., MURTAUGH, LEWIS C · 2001 to 2019
$5.9M
Fibroblast Growth Factor Regulation in the PancreasF32DK079544 · NIDDK · UT SOUTHWESTERN MEDICAL CENTER · PI HOLMSTROM, SAM R · 2007 to 2009
$148k
Howard Hughes Medical InstituteNIDDK NIH HHS F32 DK079544NIDDK NIH HHS F32-DK079544NIDDK NIH HHS R01 DK061220NIDDK NIH HHS R01-DK061220NIDDK NIH HHS U19-DK06243409
6 · The paper itself

Abstract

We have determined the cistrome and transcriptome for the nuclear receptor liver receptor homolog-1 (LRH-1) in exocrine pancreas. Chromatin immunoprecipitation (ChIP)-seq and RNA-seq analyses reveal that LRH-1 directly induces expression of genes encoding digestive enzymes and secretory and mitochondrial proteins. LRH-1 cooperates with the pancreas transcription factor 1-L complex (PTF1-L) in regulating exocrine pancreas-specific gene expression. Elimination of LRH-1 in adult mice reduced the concentration of several lipases and proteases in pancreatic fluid and impaired pancreatic fluid secretion in response to cholecystokinin. Thus, LRH-1 is a key regulator of the exocrine pancreas-specific transcriptional network required for the production and secretion of pancreatic fluid.

Indexed as

Gene Regulatory NetworksAnimalsAntineoplastic Agents, HormonalBase SequenceBlotting, WesternChromatin ImmunoprecipitationDown-RegulationFemaleGene Expression ProfilingHumansLipaseMaleMiceMice, KnockoutMice, TransgenicMolecular Sequence DataAntineoplastic Agents, HormonalLipaseNr5a2 protein, mousePeptide HydrolasesReceptors, Cytoplasmic and NuclearTamoxifentranscription factor PTF1Transcription Factors

Identifiers

PMID21852532
PMCPMC3165932
OpenAlexW2129740176

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.