Evidence map›Paper›PMID 21852235›Full record

ArticleThe Journal of biological chemistry2011

Reciprocally regulated chromatin association of Cockayne syndrome protein B and p53 protein.

Robert J Lake, Asjad Basheer, Hua-Ying Fan

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 24 citations in OpenAlex.

  1. Review
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  3. Heterochromatin: an epigenetic point of view in aging.Experimental & molecular medicine · 2020
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Robert J LakeDepartment of Biochemistry and Biophysics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania 19104-6145, USA.
Asjad Basheer
Hua-Ying Fan
University of Pennsylvania · US

Funding

Basis for Distinct Functions of ATP-Dependent Chromatin Remodeling ComplexesR01GM084983 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI FAN, HUA-YING · 2008 to 2012
$1.6M
NIGMS NIH HHS GM 084983NIGMS NIH HHS R01 GM084983
6 · The paper itself

Abstract

The Cockayne syndrome complementation group B (CSB) protein is an ATP-dependent chromatin remodeler with an essential function in transcription-coupled DNA repair, and mutations in the CSB gene are associated with Cockayne syndrome. The p53 tumor suppressor has been known to interact with CSB, and both proteins have been implicated in overlapping biological processes, such as DNA repair and aging. The significance of the interaction between CSB and p53 has remained unclear, however. Here, we show that the chromatin association of CSB and p53 is inversely related. Using in vitro binding and chromatin immunoprecipitation approaches, we demonstrate that CSB facilitates the sequence-independent association of p53 with chromatin when p53 concentrations are low and that this is achieved by the interaction of CSB with the C-terminal region of p53. Remarkably, p53 prevents CSB from binding to nucleosomes when p53 concentrations are elevated. Examining the enzymatic properties of CSB revealed that p53 excludes CSB from nucleosomes by occluding a nucleosome interaction surface on CSB. Together, our results suggest that the reciprocal regulation of chromatin access by CSB and p53 could be part of a mechanism by which these two proteins coordinate their activities to regulate DNA repair, cell survival, and aging.

Indexed as

Gene Expression RegulationAdenosine TriphosphateApoptosisCell SurvivalCellular SenescenceChromatinCockayne SyndromeDNA HelicasesDNA RepairDNA Repair EnzymesFibroblastsGenetic Complementation TestGenomeHumansModels, BiologicalModels, GeneticAdenosine TriphosphateChromatinDNA HelicasesDNA Repair EnzymesERCC6 protein, humanNucleosomesPoly-ADP-Ribose Binding ProteinsTP53 protein, humanTumor Suppressor Protein p53

Identifiers

PMID21852235
PMCPMC3186407
OpenAlexW2065893390

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.