Evidence map›Paper›PMID 21851870›Full record

ArticleDiagnostic microbiology and infectious disease2011

Distribution of Pneumocystis jirovecii in lungs from colonized COPD patients.

Sheila Sivam, Frank C Sciurba, Lorrie A Lucht, Yingze Zhang, Steven R Duncan, Karen A Norris, Alison Morris

Abstract read
In one paragraph

Article in Diagnostic microbiology and infectious disease, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
0.8field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 21 citations in OpenAlex.

  1. Antioxidants (Basel, Switzerland) · 2026
    Article
  2. Article
  3. Role of the FungusInternational journal of molecular sciences · 2024
    Article
  4. Article
  5. Journal of fungi (Basel, Switzerland) · 2023
    Article
  6. Tropical medicine and infectious disease · 2023
    Article
  7. Transmission and Colonization ofJournal of fungi (Basel, Switzerland) · 2021
    Review
  8. Importance of tissue sampling, laboratory methods, and patient characteristics for detection of Pneumocystis in autopsied lungs of non-immunosuppressed individuals.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2017
    Review
  9. Article
  10. Review
  11. HIV Associated Chronic Obstructive Pulmonary Disease in Nigeria.Journal of AIDS & clinical research · 2015
    Article
  12. Article
  13. Article
  14. Article
  15. Experimental Pneumocystis lung infection promotes M2a alveolar macrophage-derived MMP12 production.American journal of physiology. Lung cellular and molecular physiology · 2012
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Sheila SivamDepartment of Medicine, University of Pittsburgh, Pittsburgh, PA 15213, USA.
Frank C Sciurba
Lorrie A Lucht
Yingze Zhang
Steven R Duncan
Karen A Norris
Alison Morris
University of Pittsburgh · US

Funding

UNIVERSITY OF PITTSBURGH CLINICAL AND TRANSLATIONAL SCIENCE INSTITUTE: BPCAUL1RR024153 · NCRR · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI REIS, STEVEN E · 2006 to 2011
$73.9M
University of Pittsburgh Clinical and Translational Science InstituteUL1TR000005 · NCATS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI REIS, STEVEN E · 2012 to 2015
$50.8M
Peripheral Markers of Phenotypic Heterogeneity in COPDP50HL084948 · NHLBI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI DONAHOE, MICHAEL P · 2007 to 2012
$12.8M
Pneumocystis in Pathogenesis of HIV-associated EmphysemaR01HL083461 · NHLBI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI MORRIS, ALISON · 2005 to 2009
$2.2M
Epidemiology and Significance of P carinii ColonizationK23HL072837 · NHLBI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI MORRIS, ALISON · 2003 to 2007
$662k
Defining the Role of Pneumocystis in COPD PathogenesisR03HL095370 · NHLBI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI MORRIS, ALISON · 2008 to 2009
$152k
NCATS NIH HHS UL1 TR000005NCRR NIH HHS UL1 RR024153NHLBI NIH HHS HL083461NHLBI NIH HHS HL084948NHLBI NIH HHS HL095370NHLBI NIH HHS K23 HL072837NHLBI NIH HHS P50 HL084948NHLBI NIH HHS R01 HL083461NHLBI NIH HHS R03 HL095370
6 · The paper itself

Abstract

Pneumocystis jirovecii has been detected in lung tissue from patients with chronic obstructive pulmonary disease (COPD) and is associated with disease severity. The regional distribution of the organism in lungs is unknown, but differences in distribution of Pneumocystis could affect estimates of colonization prevalence. We examined the distribution of Pneumocystis in the lungs of 19 non-HIV-infected patients with COPD who were undergoing lung transplantation. DNA was extracted from explanted lungs. We found Pneumocystis colonization in lung tissue of 42.1% of patients with advanced COPD; however, there was significant regional variation in colonization between lung segments of individual patients. Colonization was detected more commonly in the lower and middle lobes than in the upper lobes. These findings suggest that single samples from an individual may underestimate the prevalence of Pneumocystis colonization and future studies may obtain a higher yield of Pneumocystis colonization detection when sampling the lower lobes.

Indexed as

AgedCross-Sectional StudiesFemaleGenes, BacterialGenes, MitochondrialGenotypeHumansLungMaleMiddle AgedPneumocystis cariniiPulmonary Disease, Chronic Obstructive

Identifiers

PMID21851870
PMCPMC3159032
OpenAlexW1997970727

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.