Evidence map›Paper›PMID 21851099›Full record

ArticleACS chemical biology2011

Chemical logic and enzymatic machinery for biological assembly of peptidyl nucleoside antibiotics.

Christopher T Walsh, Wenjun Zhang

Abstract read
In one paragraph

Article in ACS chemical biology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
1.3field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 62 citations in OpenAlex.

  1. Article
  2. Natural product reports · 2023
    Review
  3. Article
  4. Review
  5. Article
  6. Article
  7. Review
  8. Prospects for anti-Cell surface (Amsterdam, Netherlands) · 2021
    Review
  9. Review
  10. Review
  11. Article
  12. Article
  13. Cell-free synthetic biology forSynthetic and systems biotechnology · 2018
    Review
  14. Article
  15. Review
  16. Article
  17. Natural and engineered biosynthesis of nucleoside antibiotics in Actinomycetes.Journal of industrial microbiology & biotechnology · 2016
    Review
  18. Review
  19. Article
  20. Antibiotics and the gut microbiota.The Journal of clinical investigation · 2014
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 1 country.

Christopher T WalshDepartment of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, Massachusetts 02115, United States. christopher_walsh@hms.harvard.edu
Wenjun Zhang
Harvard University · USUniversity of California, Berkeley · US

Funding

The Vancomycin Biosynthetic Assembly lineR01GM049338 · NIGMS · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI WALSH, CHRISTOPHER T · 1993 to 2012
$6.2M
NIGMS NIH HHS GM49338NIGMS NIH HHS R01 GM049338
6 · The paper itself

Abstract

Peptidyl nucleoside antibiotics are a group of natural products targeting MraY, a bacterial translocase involved in the lipid-linked cycle in peptidoglycan biosynthesis. In this Perspective, we explore how Nature builds complex peptidyl nucleoside antibiotics scaffolds from simple nucleoside and amino acid building blocks. We discuss the current stage of research on biosynthetic pathways for peptidyl nucleoside antibiotics, primarily focusing on chemical logic and enzymatic machinery for uridine transformation and coupling to peptides. We further survey the nonribosomal biosynthetic paradigm for a subgroup of uridyl peptide antibiotics represented by pacidamycins, concluded by diversification opportunities for antibiotic optimization.

Indexed as

AminoglycosidesAnti-Bacterial AgentsBacteriaBacterial ProteinsNucleosidesPeptidesPyrimidine NucleosidesTransferasesTransferases (Other Substituted Phosphate Groups)UridineAminoglycosidesAnti-Bacterial AgentsBacterial ProteinscapuramycinmraY protein, BacteriaNucleosidesPeptidespolyoxinPyrimidine NucleosidesTransferasesTransferases (Other Substituted Phosphate Groups)Uridine

Identifiers

PMID21851099
PMCPMC3199363
OpenAlexW1985361284

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.