Evidence map›Paper›PMID 21851062›Full record

ArticleMolecular pharmaceutics2011

Identification and characterization of unique tumoricidal genes in rat umbilical cord matrix stem cells.

Deepthi Uppalapati, Naomi Ohta, Yongqing Zhang, Atsushi Kawabata, Marla M Pyle, Kevin G Becker, Deryl Troyer, Masaaki Tamura

Abstract read
In one paragraph

Article in Molecular pharmaceutics, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.9field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Deepthi UppalapatiDepartment of Anatomy & Physiology, College of Veterinary Medicine, Kansas State University, Manhattan, Kansas 66506, United States.
Naomi Ohta
Yongqing Zhang
Atsushi Kawabata
Marla M Pyle
Kevin G Becker
Deryl Troyer
Masaaki Tamura
Kansas State University · USNational Institute on Aging · US

Funding

UNDERSTANDING THE ROLE OF SMALL RNAS IN ARABIDOPSIS POLLEN DEVELOPMENTP20RR016475 · NCRR · UNIVERSITY OF KANSAS MEDICAL CENTER · PI ACKLEY, BRIAN DOUGLAS · 2001 to 2011
$38.1M
TRANSEPITHELIAL ION TRANSPORT &ITS REGULATIONP20RR017686 · NCRR · KANSAS STATE UNIVERSITY · PI MELGAREJO GARCIA, LUIS TONATIUH · 2002 to 2011
$21.8M
Analysis of complex biological systems by microarray based gene expressionZICAG000616 · NIA · NATIONAL INSTITUTE ON AGING · PI DE, SUPRIYO · 2009 to 2025
$15.5M
Stem cells as vehicles for therapeutic nanoparticle delivery to breast cancerR21CA135599 · NCI · KANSAS STATE UNIVERSITY · PI TROYER, DERYL LEE · 2008 to 2009
$359k
Intramural NIH HHSNCI NIH HHS R21 CA135599NCI NIH HHS R21CA135599NCRR NIH HHS P20 RR01556NCRR NIH HHS P20 RR016475NCRR NIH HHS P20 RR017686
6 · The paper itself

Abstract

Rat umbilical cord matrix stem cells (UCMSC) have been shown to exhibit a remarkable ability to control rat mammary adenocarcinoma (Mat B III) cell proliferation both in vivo and in vitro. To study the underlying mechanisms and genes involved in Mat B III growth attenuation, total RNA was extracted from the naive rat UCMSC alone and those cocultured with Mat B III in Transwell culture dishes. Gene expression profiles of naive rat UCMSC alone and those cocultured with Mat B III cells were investigated by microarray analysis using an Illumina RatRef-12 Expression BeadChip. The comparison of gene expression profiles between untreated and cocultured rat UCMSC identified five upregulated candidate genes (follistatin (FST), sulfatase1 (SULF-1), glucose phosphate isomerase (GPI), HtrA serine peptidase (HTRA1), and adipocyte differentiation-related protein (ADRP)) and two downregulated candidate genes (transforming growth factor, beta-induced, 68 kDa (TGFβI) and podoplanin (PDPN)) based upon the following screening criteria: (1) expression of the candidate genes should show at least a 1.5-fold change in rat UCMSC cocultured with Mat B III cells; (2) candidate genes encode secretory proteins; and (3) they encode cell growth-related proteins. Following confirmation of gene expression by real-time PCR, ADRP, SULF-1 and GPI were selected for further analysis. Addition of specific neutralizing antibodies against these three gene products or addition of gene-specific siRNA's individually in cocultures of 1:20 rat UCMSC:Mat B III cells significantly increased cell proliferation, implying that these gene products are produced under the cocultured condition and functionally attenuate cell growth. Immunoprecipitation followed by Western blot analysis demonstrated that these proteins are indeed secreted into the culture medium. Individual overexpression of these three genes in rat UCMSC significantly enhanced UCMSC-dependent inhibition of cell proliferation in coculture. These results suggest that ADRP, SULF-1 and GPI act as tumor suppressor genes, and these genes might be involved in rat UCMSC-dependent growth attenuation of rat mammary tumors.

Indexed as

AdenocarcinomaAnimalsBreast NeoplasmsCell CommunicationCell Line, TumorCell ProliferationCells, CulturedCoculture TechniquesCytokinesEmbryonic Stem CellsFemaleGene Expression ProfilingGlucose-6-Phosphate IsomeraseMembrane ProteinsPerilipin-2PregnancyCytokinesGlucose-6-Phosphate IsomeraseGpi protein, ratMembrane ProteinsPerilipin-2Plin2 protein, ratRNA, MessengerRNA, Small InterferingSulf1 protein, ratSulfotransferasesTumor Suppressor Proteins

Identifiers

PMID21851062
PMCPMC3202613
OpenAlexW2114221909

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.