Evidence map›Paper›PMID 21847315›Full record

ArticleStatistical science : a review journal of the Institute of Mathematical Statistics2010

Graphics Processing Units and High-Dimensional Optimization.

Hua Zhou, Kenneth Lange, Marc A Suchard

Abstract read
In one paragraph

Article in Statistical science : a review journal of the Institute of Mathematical Statistics, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed.

  1. Article
  2. Article
  3. Massive Parallelization of Massive Sample-size Survival Analysis.Journal of computational and graphical statistics : a joint publication of American Statistical Association, Institute of Mathematical Statistics, Interface Foundation of North America · 2024
    Article
  4. Article
  5. High-Performance Statistical Computing in the Computing Environments of the 2020s.Statistical science : a review journal of the Institute of Mathematical Statistics · 2022
    Article
  6. Article
  7. Article
  8. Massive parallelization boosts big Bayesian multidimensional scaling.Journal of computational and graphical statistics : a joint publication of American Statistical Association, Institute of Mathematical Statistics, Interface Foundation of North America · 2021
    Article
  9. Article
  10. Regression Models For Multivariate Count Data.Journal of computational and graphical statistics : a joint publication of American Statistical Association, Institute of Mathematical Statistics, Interface Foundation of North America · 2017
    Article
  11. GPU-powered Shotgun Stochastic Search for Dirichlet process mixtures of Gaussian Graphical Models.Journal of computational and graphical statistics : a joint publication of American Statistical Association, Institute of Mathematical Statistics, Interface Foundation of North America · 2016
    Article
  12. Article
  13. Article
  14. Estimation for general birth-death processes.Journal of the American Statistical Association · 2014
    Article
  15. A Brief Survey of Modern Optimization for Statisticians.International statistical review = Revue internationale de statistique · 2014
    Article
  16. Article
  17. Review
  18. Massive parallelization of serial inference algorithms for a complex generalized linear model.ACM transactions on modeling and computer simulation : a publication of the Association for Computing Machinery · 2013
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Hua ZhouDepartment of Statistics, North Carolina State University, Raleigh, NC 27695-8203.
Kenneth Lange
Marc A Suchard

Funding

STATISTICAL METHODS FOR GENE MAPPINGR01GM053275 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI LANGE, KENNETH L · 1995 to 2019
$9.3M
Quantitative Trait Locus Mapping in Human PedigreesR37MH059490 · NIMH · TEXAS BIOMEDICAL RESEARCH INSTITUTE · PI BLANGERO, JOHN · 2001 to 2010
$6.8M
Bayesian Joint Estimation of Alignment and PhylogenyR01GM086887 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI SUCHARD, MARC A. · 2008 to 2012
$1.5M
QUANTITATIVE TRAIT LOCUS MAPPING IN HUMAN PEDIGREESR01MH059490 · NIMH · SOUTHWEST FOUNDATION FOR BIOMEDICAL RES · PI BLANGERO, JOHN · 1998 to 2000
$426k
NIGMS NIH HHS R01 GM053275NIGMS NIH HHS R01 GM086887NIMH NIH HHS R01 MH059490NIMH NIH HHS R37 MH059490
6 · The paper itself

Abstract

This paper discusses the potential of graphics processing units (GPUs) in high-dimensional optimization problems. A single GPU card with hundreds of arithmetic cores can be inserted in a personal computer and dramatically accelerates many statistical algorithms. To exploit these devices fully, optimization algorithms should reduce to multiple parallel tasks, each accessing a limited amount of data. These criteria favor EM and MM algorithms that separate parameters and data. To a lesser extent block relaxation and coordinate descent and ascent also qualify. We demonstrate the utility of GPUs in nonnegative matrix factorization, PET image reconstruction, and multidimensional scaling. Speedups of 100 fold can easily be attained. Over the next decade, GPUs will fundamentally alter the landscape of computational statistics. It is time for more statisticians to get on-board.

Identifiers

PMID21847315
PMCPMC3155776

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.