ArticleDatabase : the journal of biological databases and curation2009
MaizeGDB becomes 'sequence-centric'.
Article in Database : the journal of biological databases and curation, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
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Who cites it
35 citing papers in PubMed.
- PanEffect: a pan-genome visualization tool for variant effects in maize.Bioinformatics (Oxford, England) · 2024Article
- Functional gene categories differentiate maize leaf drought-related microbial epiphytic communities.PloS one · 2020Article
- MaizeGDB 2018: the maize multi-genome genetics and genomics database.Nucleic acids research · 2019Article
- MaizeDIG: Maize Database of Images and Genomes.Frontiers in plant science · 2019Article
- The transcriptome of zinc deficient maize roots and its relationship to DNA methylation loss.BMC plant biology · 2018Article
- Maize GO Annotation-Methods, Evaluation, and Review (maize-GAMER).Plant direct · 2018Article
- Massive Loss of DNA Methylation in Nitrogen-, but Not in Phosphorus-DeficientFrontiers in plant science · 2018Article
- Global analysis of gene expression in maize leaves treated with low temperature. II. Combined effect of severe cold (8 °C) and circadian rhythm.Plant molecular biology · 2017Article
- Responses to Hypoxia and Endoplasmic Reticulum Stress Discriminate the Development of Vitreous and Floury Endosperms of Conventional Maize (Frontiers in plant science · 2017Article
- Genetic Mapping of the Leaf Number above the Primary Ear and Its Relationship with Plant Height and Flowering Time in Maize.Frontiers in plant science · 2017Article
- The quality of metabolic pathway resources depends on initial enzymatic function assignments: a case for maize.BMC systems biology · 2016Article
- Article
- MaizeGDB update: new tools, data and interface for the maize model organism database.Nucleic acids research · 2016Article
- Plastid Genotyping Reveals the Uniformity of Cytoplasmic Male Sterile-T Maize Cytoplasms.Plant physiology · 2015Article
- Transformation of rice with large maize genomic DNA fragments containing high content repetitive sequences.Plant cell reports · 2015Article
- Automated update, revision, and quality control of the maize genome annotations using MAKER-P improves the B73 RefGen_v3 gene models and identifies new genes.Plant physiology · 2015Article
- A computational platform to maintain and migrate manual functional annotations for BioCyc databases.BMC systems biology · 2014Article
- Discovery of novel transcripts and gametophytic functions via RNA-seq analysis of maize gametophytic transcriptomes.Genome biology · 2014Article
- Efficient molecular marker design using the MaizeGDB Mo17 SNPs and Indels track.G3 (Bethesda, Md.) · 2014Article
- Dynamic expression of imprinted genes associates with maternally controlled nutrient allocation during maize endosperm development.The Plant cell · 2013Article
Corrections and comments
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Authors and funding
10 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
MaizeGDB is the maize research community's central repository for genetic and genomic information about the crop plant and research model Zea mays ssp. mays. The MaizeGDB team endeavors to meet research needs as they evolve based on researcher feedback and guidance. Recent work has focused on better integrating existing data with sequence information as it becomes available for the B73, Mo17 and Palomero Toluqueño genomes. Major endeavors along these lines include the implementation of a genome browser to graphically represent genome sequences; implementation of POPcorn, a portal ancillary to MaizeGDB that offers access to independent maize projects and will allow BLAST similarity searches of participating projects' data sets from a single point; and a joint MaizeGDB/PlantGDB project to involve the maize community in genome annotation. In addition to summarizing recent achievements and future plans, this article also discusses specific examples of community involvement in setting priorities and design aspects of MaizeGDB, which should be of interest to other database and resource providers seeking to better engage their users. MaizeGDB is accessible online at http://www.maizegdb.org.Database URL:http://www.maizegdb.org.
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.