Evidence map›Paper›PMID 21846818›Full record

ArticleCancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology2011

Genetic variants in the LEPR, CRY1, RNASEL, IL4, and ARVCF genes are prognostic markers of prostate cancer-specific mortality.

Daniel W Lin, Liesel M FitzGerald, Rong Fu, Erika M Kwon, Siqun Lilly Zheng, Suzanne Kolb, Fredrik Wiklund, Pär Stattin, William B Isaacs, Jianfeng Xu and 4 more

Open access · bronzeAbstract read
In one paragraph

Article in Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers, 4 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed, 4 pooled it
6.1field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 4 syntheses or guidelines pooled it, 83 citations in OpenAlex.

  1. Pooled it
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  10. Circadian rhythm disruption and endocrine-related tumors.World journal of clinical oncology · 2024
    Review
  11. Article
  12. Cancer, hear my battle CRY.Journal of pineal research · 2020
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 6 institutions in 2 countries.

Daniel W LinDepartment of Urology, University of Washington School of Medicine, Seattle, WA, USA.
Liesel M FitzGerald
Rong Fu
Erika M Kwon
Siqun Lilly Zheng
Suzanne Kolb
Fredrik Wiklund
Pär Stattin
William B Isaacs
Jianfeng Xu
Elaine A Ostrander
Ziding Feng
Henrik Grönberg
Janet L Stanford
University of Washington · USJohns Hopkins University · USNational Human Genome Research Institute · USFred Hutch Cancer Center · USKarolinska Institutet · SEWake Forest University · US

Funding

TRANSCRIPTOME AND PROTEOME STRATIFICATION OF PROSTATE ADENOCARCINOMA PHENOTYPESP50CA097186 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI John Kyung Lee · 2002 to 2026
$58.1M
Finding Genes for Human Prostate CancerZIAHG200325 · NHGRI · NATIONAL HUMAN GENOME RESEARCH INSTITUTE · PI OSTRANDER, ELAINE · 2009 to 2021
$17.7M
Predoctoral Training Program in Human GeneticsT32GM007814 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI VALLE, DAVID · 1985 to 2021
$10.6M
NSAIDS and Other Medications in Prostate Cancer EtiologyR01CA092579 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI STANFORD, JANET L · 2001 to 2005
$3.2M
Confirmation of SNPs Associated with Aggressive PCa in a GWA StudyR01CA129684 · NCI · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI XU, JIANFENG · 2008 to 2011
$2.4M
Genetics Variants in the Genome Predisposing to Aggressive PCaR01CA133009 · NCI · JOHNS HOPKINS UNIVERSITY · PI ISAACS, WILLIAM B, ZHENG, SIQUN L · 2009 to 2011
$1.8M
Inflammatory Pathway Gene Polymorphisms and Risk of Prostate CancerR03CA121871 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI STANFORD, JANET L · 2007 to 2008
$176k
Estrogen Pathway Genes and Association with Prostate Cancer RiskR03CA137799 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI STANFORD, JANET L · 2008 to 2009
$176k
PROSTATE CANCER IN RELATION TO VASECTOMYR01CA056678 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI STANFORD, JANET L · 1993 to 1997
–
NCI NIH HHS P50 CA097186NCI NIH HHS R01 CA056678NCI NIH HHS R01 CA092579NCI NIH HHS R01 CA129684NCI NIH HHS R01 CA133009NCI NIH HHS R03 CA121871NCI NIH HHS R03 CA137799NIGMS NIH HHS T32 GM007814
6 · The paper itself

Abstract

backgroundProstate cancer is the second leading cause of cancer-related deaths in men, accounting for more than 30,000 deaths annually. The purpose of this study was to test whether variation in selected candidate genes in biological pathways of interest for prostate cancer progression could help distinguish patients at higher risk for fatal prostate cancer.

methodsIn this hypothesis-driven study, we genotyped 937 single nucleotide polymorphisms (SNPs) in 156 candidate genes in a population-based cohort of 1,309 prostate cancer patients. We identified 22 top-ranking SNPs (P ≤ 0.01, FDR ≤ 0.70) associated with prostate cancer-specific mortality (PCSM). A subsequent validation study was completed in an independent population-based cohort of 2,875 prostate cancer patients.

resultsFive SNPs were validated (P ≤ 0.05) as being significantly associated with PCSM, one each in the LEPR, CRY1, RNASEL, IL4, and ARVCF genes. Compared with patients with 0 to 2 of the at-risk genotypes those with 4 to 5 at-risk genotypes had a 50% (95% CI, 1.2-1.9) higher risk of PCSM and risk increased with the number of at-risk genotypes carried (P(trend) = 0.001), adjusting for clinicopathologic factors known to influence prognosis.

conclusionFive genetic markers were validated to be associated with lethal prostate cancer. IMPACT: This is the first population-based study to show that germline genetic variants provide prognostic information for prostate cancer-specific survival. The clinical utility of this five-SNP panel to stratify patients at higher risk for adverse outcomes should be evaluated.

Indexed as

AdultAgedArmadillo Domain ProteinsCell Adhesion MoleculesCohort StudiesCryptochromesEndoribonucleasesGenetic Predisposition to DiseaseGenetic VariationHumansInterleukin-4MaleMiddle AgedPhosphoproteinsPolymorphism, Single NucleotidePrognosis2-5A-dependent ribonucleaseArmadillo Domain ProteinsARVCF protein, humanCell Adhesion MoleculesCRY1 protein, humanCryptochromesEndoribonucleasesInterleukin-4PhosphoproteinsReceptors, Leptin

Identifiers

PMID21846818
PMCPMC3169727
OpenAlexW2104277744

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.