Evidence map›Paper›PMID 21844311›Full record

ArticleAntimicrobial agents and chemotherapy2011

Citrobacter spp. as a source of qnrB Alleles.

George A Jacoby, Caitlin M Griffin, David C Hooper

Open access · bronzeAbstract read
In one paragraph

Article in Antimicrobial agents and chemotherapy, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 53 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
53citing papers in PubMed, 1 pooled it
3.4field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

53 citing papers in PubMed, 1 synthesis or guideline pooled it, 105 citations in OpenAlex.

  1. Plasmid-mediated quinolone resistance in Enterobacteriaceae: a systematic review with a focus on Mediterranean countries.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2017
    Pooled it
  2. Genomic landscape ofApplied and environmental microbiology · 2026
    Article
  3. TheInternational journal of molecular sciences · 2026
    Review
  4. Article
  5. NDM- or VIM-producing Citrobacter spp. in Poland, 2011-19: high genetic diversity with broader representation of ST8, ST18 and ST22 global clones.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2025
    Article
  6. Applied and environmental microbiology · 2024
    Article
  7. Review
  8. Review
  9. Article
  10. Article
  11. Article
  12. A brief insight intoFrontiers in antibiotics · 2023
    Review
  13. Review
  14. Identification ofAntimicrobial agents and chemotherapy · 2021
    Article
  15. The Gut Microbiome as a Reservoir for Antimicrobial Resistance.The Journal of infectious diseases · 2021
    Review
  16. Article
  17. Article
  18. Draft Genome Sequences of FourMicrobiology resource announcements · 2021
    Article
  19. Article
  20. Emergence ofFrontiers in microbiology · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

George A JacobyLahey Clinic, Burlington, Massachusetts 01805-6208, USA. george.a.jacoby@lahey.org
Caitlin M Griffin
David C Hooper
Lahey Hospital and Medical Center · USMassachusetts General Hospital · US

Funding

Plasmid-mediated Quinolone ResistanceR01AI057576 · NIAID · MASSACHUSETTS GENERAL HOSPITAL · PI HOOPER, DAVID C · 2004 to 2018
$5.3M
NIAID NIH HHS R01 AI057576
6 · The paper itself

Abstract

qnrB is the most common of the five qnr families and has the greatest number of allelic variants. Almost two-thirds of the qnrB alleles have been reported in Citrobacter spp., and several were shown to be located on the chromosome. In this study, PCR was used to investigate the prevalence of plasmid-mediated quinolone resistance genes in 71 clinical isolates belonging to the Citrobacter freundii complex. Thirty-seven percent contained qnrB alleles, including 7 (qnrB32 to qnrB38) that were novel and 1 pseudogene, while none contained qnrA, qnrC, qnrD, qnrS, or aac(6')-Ib-cr. When the strains were arrayed by related 16S rRNA sequence and further separated into subspecies by biochemical criteria, clustering of qnrB-positive strains was evident. In only two strains with qnrB2 and qnrB4 was quinolone resistance transferable by conjugation, and only these strains contained the ISCR1 sequence that is often associated with qnrB on plasmids. Five of 26 qnrB-positive strains contained integrase genes, but these included the strains with qnrB2 and qnrB4 as well as two strains with other transmissible plasmids. In a fully sequenced genome of Citrobacter youngae, a member of the C. freundii complex, another novel qnrB allele, qnrB39, occurs in a sequence of genes that is 90% identical to sequence surrounding integron-associated qnrB4 incorporated into plasmids. The chromosome of Citrobacter is the likely source of plasmid-mediated qnrB.

Indexed as

AllelesAnti-Bacterial AgentsBacterial ProteinsChromosomes, BacterialCiprofloxacinCitrobacterCitrobacter freundiiDrug Resistance, BacterialMicrobial Sensitivity TestsMolecular Sequence DataPolymerase Chain ReactionQuinolonesRNA, Ribosomal, 16SSequence Analysis, DNAAnti-Bacterial AgentsBacterial ProteinsCiprofloxacinQuinolonesRNA, Ribosomal, 16S

Identifiers

PMID21844311
PMCPMC3195048
OpenAlexW2123723703

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.