Evidence map›Paper›PMID 21843491›Full record

ArticleBiophysical journal2011

Rapid and quantitative imaging of excitation polarized fluorescence reveals ordered septin dynamics in live yeast.

Bradley S DeMay, Naoki Noda, Amy S Gladfelter, Rudolf Oldenbourg

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed
1.6field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed, 78 citations in OpenAlex.

  1. Article
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  3. Volumetric imaging of the 3D orientation of cellular structures with a polarized fluorescence light-sheet microscope.Proceedings of the National Academy of Sciences of the United States of America · 2025
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  15. Spatio-angular fluorescence microscopy III. Constrained angular diffusion, polarized excitation, and high-NA imaging.Journal of the Optical Society of America. A, Optics, image science, and vision · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Bradley S DeMayDepartment of Biological Sciences, Dartmouth College, Hanover, New Hampshire, USA.
Naoki Noda
Amy S Gladfelter
Rudolf Oldenbourg
Dartmouth College · USMarine Biological Laboratory · US

Funding

Development of New Automated Polarized Light MicroscopeR01EB002583 · NIBIB · MARINE BIOLOGICAL LABORATORY · PI OLDENBOURG, RUDOLF · 2004 to 2012
$4.4M
NIBIB NIH HHS EB002583NIBIB NIH HHS R01 EB002583
6 · The paper itself

Abstract

We report an imaging method for fast, sensitive analysis of the orientation of fluorescent molecules by employing a liquid-crystal based universal polarizer in the optical path of a wide-field light microscope. We developed specific acquisition and processing algorithms for measuring the anisotropy and for correcting artifacts caused by fluorescence bleaching, background light, and differential transmission of optical components. We call this approach the Fluorescence LC-PolScope and we used it to analyze the architectural dynamics of septin-green fluorescent protein (septin-GFP) constructs in the neck region of budding yeast. We describe three different states of highly anisotropic septin arrays in which the prevailing orientation of GFP dipoles was either parallel or perpendicular to the mother-bud axis. The transitions between these ordered states were characterized by transient isotropic states. To analyze the patterns of polarized fluorescence, we modeled the alignment of septin-GFP constructs in different stages of septin ring formation. Based on our model, our experimental data are consistent with the formation of paired rather than single filaments and the axis of the α-helical septin terminus linked to a GFP molecule is likely oriented normal to the cell surface. The Fluorescence LC-PolScope combines the molecular specificity of fluorescence tagging with the structural specificity of polarized light analysis.

Indexed as

AnisotropyCrystallizationFluorescence PolarizationGreen Fluorescent ProteinsImaging, Three-DimensionalMicroscopy, FluorescenceModels, MolecularRecombinant Fusion ProteinsSaccharomyces cerevisiaeSeptinsGreen Fluorescent ProteinsRecombinant Fusion ProteinsSeptins

Identifiers

PMID21843491
PMCPMC3175061
OpenAlexW1973897686

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.