Evidence map›Paper›PMID 21841177›Full record

ArticleJournal of experimental botany2011

Label-free shotgun proteomics and metabolite analysis reveal a significant metabolic shift during citrus fruit development.

Ehud Katz, Kyung Hwan Boo, Ho Youn Kim, Richard A Eigenheer, Brett S Phinney, Vladimir Shulaev, Florence Negre-Zakharov, Avi Sadka, Eduardo Blumwald

Open access · hybridAbstract read
In one paragraph

Article in Journal of experimental botany, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 52 papers.

0numbers the graph read from it
0cells of the map it votes in
52citing papers in PubMed
7.8field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

52 citing papers in PubMed, 119 citations in OpenAlex.

  1. Article
  2. Article
  3. ATP Citrate LyasePlants (Basel, Switzerland) · 2024
    Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Gamma-Aminobutyric Acid Accumulation Contributes toPlants (Basel, Switzerland) · 2023
    Article
  10. Analysis of Flavonoid Metabolites inFoods (Basel, Switzerland) · 2023
    Article
  11. Identification ofInternational journal of molecular sciences · 2023
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Metabolomic Profiling ofPlants (Basel, Switzerland) · 2022
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Ehud KatzDepartment of Plant Sciences, University of California, Davis, CA 95616, USA.
Kyung Hwan Boo
Ho Youn Kim
Richard A Eigenheer
Brett S Phinney
Vladimir Shulaev
Florence Negre-Zakharov
Avi Sadka
Eduardo Blumwald
University of California, Davis · USAgricultural Research Organization · ILUniversity of North Texas · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Label-free LC-MS/MS-based shot-gun proteomics was used to quantify the differential protein synthesis and metabolite profiling in order to assess metabolic changes during the development of citrus fruits. Our results suggested the occurrence of a metabolic change during citrus fruit maturation, where the organic acid and amino acid accumulation seen during the early stages of development shifted into sugar synthesis during the later stage of citrus fruit development. The expression of invertases remained unchanged, while an invertase inhibitor was up-regulated towards maturation. The increased expression of sucrose-phosphate synthase and sucrose-6-phosphate phosphatase and the rapid sugar accumulation suggest that sucrose is also being synthesized in citrus juice sac cells during the later stage of fruit development.

Indexed as

CitrusFruitGene Expression Regulation, PlantGlucosyltransferasesPhosphoric Monoester HydrolasesPlant ProteinsProteomicsTandem Mass SpectrometryGlucosyltransferasesPhosphoric Monoester HydrolasesPlant Proteinssucrose-phosphatasesucrose-phosphate synthase

Identifiers

PMID21841177
PMCPMC3223037
OpenAlexW2117485599

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.