Evidence map›Paper›PMID 21840984›Full record

ArticleJournal of bacteriology2011

Bacterioopsin-mediated regulation of bacterioruberin biosynthesis in Halobacterium salinarum.

Antoinette M Dummer, Jessica C Bonsall, Jacob B Cihla, Stephanie M Lawry, Gabriela C Johnson, Ronald F Peck

Open access · bronzeAbstract read
In one paragraph

Article in Journal of bacteriology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
0.7field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 59 citations in OpenAlex.

  1. Review
  2. A New Era for Using Natural Pigments: The Case of the CBiotechnology and applied biochemistry · 2026
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  11. Structural basis for carotenoid cleavage by an archaeal carotenoid dioxygenase.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  12. Acid Experimental Evolution of the HaloarchaeonFrontiers in microbiology · 2020
    Article
  13. Review
  14. Review
  15. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Antoinette M DummerDepartment of Biology, Lawrence University, Appleton, Wisconsin 54911, USA.
Jessica C Bonsall
Jacob B Cihla
Stephanie M Lawry
Gabriela C Johnson
Ronald F Peck
Lawrence University · US

Funding

Investigating Regulation of Integral Membrane Protein Cofactor Biosynthesis usingR15GM094735 · NIGMS · LAWRENCE UNIVERSITY · PI PECK, RONALD F · 2011 to 2011
$289k
NIGMS NIH HHS R15 GM094735NIGMS NIH HHS R15GM094735
6 · The paper itself

Abstract

Integral membrane protein complexes consisting of proteins and small molecules that act as cofactors have important functions in all organisms. To form functional complexes, cofactor biosynthesis must be coordinated with the production of corresponding apoproteins. To examine this coordination, we study bacteriorhodopsin (BR), a light-induced proton pump in the halophilic archaeon Halobacterium salinarum. This complex consists of a retinal cofactor and bacterioopsin (BO), the BR apoprotein. To examine possible novel regulatory mechanisms linking BO and retinal biosynthesis, we deleted bop, the gene that encodes BO. bop deletion resulted in a dramatic increase of bacterioruberins, carotenoid molecules that share biosynthetic precursors with retinal. Additional studies revealed that bacterioruberins accumulate in the absence of BO regardless of the presence of retinal or BR, suggesting that BO inhibits bacterioruberin biosynthesis to increase the availability of carotenoid precursors for retinal biosynthesis. To further examine this potential regulatory mechanism, we characterized an enzyme, encoded by the lye gene, that catalyzes bacterioruberin biosynthesis. BO-mediated inhibition of bacterioruberin synthesis appears to be specific to the H. salinarum lye-encoded enzyme, as expression of a lye homolog from Haloferax volcanii, a related archaeon that synthesizes bacterioruberins but lacks opsins, resulted in bacterioruberin synthesis that was not reduced in the presence of BO. Our results provide evidence for a novel regulatory mechanism in which biosynthesis of a cofactor is promoted by apoprotein-mediated inhibition of an alternate biochemical pathway. Specifically, BO accumulation promotes retinal production by inhibiting bacterioruberin biosynthesis.

Indexed as

Gene Expression Regulation, ArchaealArchaeal ProteinsBacteriorhodopsinsCarotenoidsHalobacterium salinarumRetinaldehydeArchaeal Proteinsbacterio-opsinBacteriorhodopsinsbacterioruberinCarotenoidsRetinaldehyde

Identifiers

PMID21840984
PMCPMC3187228
OpenAlexW2150605667

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.