Evidence map›Paper›PMID 21840903›Full record

ArticleNucleic acids research2011

Stacking of G-quadruplexes: NMR structure of a G-rich oligonucleotide with potential anti-HIV and anticancer activity.

Ngoc Quang Do, Kah Wai Lim, Ming Hoon Teo, Brahim Heddi, Anh Tuân Phan

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 82 papers.

0numbers the graph read from it
0cells of the map it votes in
82citing papers in PubMed
5.9field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

82 citing papers in PubMed, 189 citations in OpenAlex.

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  12. Quenching of G4-DNA intrinsic fluorescence by ligands.European biophysics journal : EBJ · 2024
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  17. Creation and resolution of non-B-DNA structural impediments during replication.Critical reviews in biochemistry and molecular biology · 2022
    Article
  18. Antiproliferative Effects of the Aptamer d(GGGT)International journal of molecular sciences · 2022
    Article
  19. Article
  20. Article

22 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Ngoc Quang DoSchool of Physical and Mathematical Sciences and School of Biological Sciences, Nanyang Technological University, Singapore.
Kah Wai Lim
Ming Hoon Teo
Brahim Heddi
Anh Tuân Phan
Nanyang Technological University · SG

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

G-rich oligonucleotides T30695 (or T30923), with the sequence of (GGGT)(4), and T40214, with the sequence of (GGGC)(4), have been reported to exhibit anti-HIV and anticancer activity. Here we report on the structure of a dimeric G-quadruplex adopted by a derivative of these sequences in K(+) solution. It comprises two identical propeller-type parallel-stranded G-quadruplex subunits each containing three G-tetrad layers that are stacked via the 5'-5' interface. We demonstrated control over the stacking of the two monomeric subunits by sequence modifications. Our analysis of possible structures at the stacking interface provides a general principle for stacking of G-quadruplexes, which could have implications for the assembly and recognition of higher-order G-quadruplex structures.

Indexed as

G-QuadruplexesAntineoplastic AgentsGuanineHIV IntegraseHIV Integrase InhibitorsInosineModels, MolecularNuclear Magnetic Resonance, BiomolecularOligonucleotidesPotassiumAntineoplastic AgentsGuanineHIV IntegraseHIV Integrase InhibitorsInosineOligonucleotidesp31 integrase protein, Human immunodeficiency virus 1Potassium

Identifiers

PMID21840903
PMCPMC3241632
OpenAlexW2116107651

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.