Evidence map›Paper›PMID 21840396›Full record

ArticleMethods (San Diego, Calif.)2011

Simple screening method for improving membrane protein thermostability.

Romina Mancusso, Nathan K Karpowich, Bryan K Czyzewski, Da-Neng Wang

Abstract read
In one paragraph

Article in Methods (San Diego, Calif.), 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed.

  1. Biophysical Characterization of Membrane Proteins.Methods in molecular biology (Clifton, N.J.) · 2023
    Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Review
  8. Single-Particle Cryo-EM of Membrane Proteins.Methods in molecular biology (Clifton, N.J.) · 2021
    Article
  9. Structure Determination of Membrane Proteins Using X-Ray Crystallography.Methods in molecular biology (Clifton, N.J.) · 2021
    Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Romina MancussoThe Helen L. and Martin S. Kimmel Center for Biology and Medicine at the Skirball Institute of Biomolecular Medicine, Department of Cell Biology, New York University School of Medicine, 540 First Avenue, New York, NY 10016, USA.
Nathan K Karpowich
Bryan K Czyzewski
Da-Neng Wang

Funding

Sub 9 at AECMU54GM075026 · NIGMS · NEW YORK STRUCTURAL BIOLOGY CENTER · PI HUNT, JOHN FRANCIS · 2005 to 2009
$16.8M
Structural Genomics on Membrane ProteinsU54GM095315 · NIGMS · NEW YORK STRUCTURAL BIOLOGY CENTER · PI ROST, BURKHARD · 2010 to 2014
$15.2M
Case Center for Synchrotron BiosciencesP30EB009998 · NIBIB · CASE WESTERN RESERVE UNIVERSITY · PI CHANCE, MARK R · 2009 to 2018
$8.4M
STRUCTURAL STUDIES OF SUGAR TRANSPORTERSR01DK053973 · NIDDK · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI WANG, DANENG · 1998 to 2014
$3.6M
Structural and Mechanistic Characterization of Neurotransmitter Reuptake InhibitiR01MH083840 · NIMH · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI WANG, DANENG · 2008 to 2012
$2.2M
Structural Basis of Tetracycline Resistance by Efflux Pump TetL.R01GM093825 · NIGMS · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI WANG, DANENG · 2010 to 2014
$1.4M
Intra-renal Bold MRI: Application to Diabetic NephropathyR01DK073973 · NIDDK · NORTHSHORE UNIVERSITY HEALTHSYSTEM · PI PRASAD, POTTUMARTHI V · 2007 to 2009
$677k
Structural Biology of the Sodium-Calcium ExchangerF32HL091618 · NHLBI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI KARPOWICH, NATHAN KYLE · 2008 to 2010
$155k
Structural Studies of a Tetracycline Efflux PumpF31AI086072 · NIAID · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI CZYZEWSKI, BRYAN K. · 2010 to 2011
$78k
NHLBI NIH HHS F32 HL091618NHLBI NIH HHS HL091618NIAID NIH HHS AI086072NIAID NIH HHS F31 AI086072NIDDK NIH HHS DK053973-08A1S2NIDDK NIH HHS DK073973NIDDK NIH HHS R01 DK053973NIDDK NIH HHS R01 DK073973NIGMS NIH HHS GM075026NIGMS NIH HHS GM093825NIGMS NIH HHS R01 GM093825NIGMS NIH HHS U54 GM075026NIGMS NIH HHS U54 GM095315NIMH NIH HHS MH083840NIMH NIH HHS R01 MH083840
6 · The paper itself

Abstract

Biochemical and biophysical analysis on integral membrane proteins often requires monodisperse and stable protein samples. Here we describe a method to characterize protein thermostability by measuring its melting temperature in detergent using analytical size-exclusion chromatography. This quantitative method can be used to screen for compounds and conditions that stabilize the protein. With this technique we were able to assess and improve the thermostability of several membrane proteins. These conditions were in turn used to assist purification, to identify protein ligand and to improve crystal quality.

Indexed as

Anion Transport ProteinsBacterial ProteinsChromatography, AffinityChromatography, GelCrystallizationCrystallography, X-RayGlucosidesHumansMembrane ProteinsPhosphatidate PhosphataseProtein StabilitySolubilityTransition TemperatureAnion Transport ProteinsBacterial Proteinsdodecyl maltosideGlucosideslipid phosphate phosphataseMembrane ProteinsPhosphatidate Phosphatase

Identifiers

PMID21840396
PMCPMC3220791

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.