Evidence map›Paper›PMID 21839736›Full record

ArticleDevelopmental biology2011

EBF proteins participate in transcriptional regulation of Xenopus muscle development.

Yangsook Song Green, Monica L Vetter

Open access · greenAbstract read
In one paragraph

Article in Developmental biology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
1.2field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 38 citations in OpenAlex.

  1. Article
  2. EBF3 Gene-Related Fetal Phenotypes.Maternal-fetal medicine (Wolters Kluwer Health, Inc.) · 2025
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  8. Neuroimaging Findings in Patients withMolecular syndromology · 2021
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  9. Review
  10. Evolution of Somite Compartmentalization: A View FromFrontiers in cell and developmental biology · 2021
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  11. Review
  12. Article
  13. Review
  14. Article
  15. Article
  16. Gene regulatory networks and cell lineages that underlie the formation of skeletal muscle.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  17. Novel de novo variant inCold Spring Harbor molecular case studies · 2017
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  18. Article
  19. Article
  20. Journal of cardiovascular development and disease · 2016
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Yangsook Song GreenDepartment of Neurobiology and Anatomy, University of Utah School of Medicine, Salt Lake City, UT 84132, USA. yangsook@neuro.utah.edu
Monica L Vetter
University of Utah · US

Funding

University of Utah, Core Vision Research GrantP30EY014800 · NEI · UTAH STATE HIGHER EDUCATION SYSTEM--UNIVERSITY OF UTAH · PI PAUL STEVEN BERNSTEIN · 2005 to 2026
$14.6M
REGULATION OF RETINAL NEUROGENESIS BY XATH5R01EY012274 · NEI · UNIVERSITY OF UTAH · PI VETTER, MONICA L · 1998 to 2021
$7.2M
NEI NIH HHS EY012274NEI NIH HHS P30 EY014800NEI NIH HHS R01 EY012274
6 · The paper itself

Abstract

EBF proteins have diverse functions in the development of multiple lineages, including neurons, B cells and adipocytes. During Drosophila muscle development EBF proteins are expressed in muscle progenitors and are required for muscle cell differentiation, but there is no known function of EBF proteins in vertebrate muscle development. In this study, we examine the expression of ebf genes in Xenopus muscle tissue and show that EBF activity is necessary for aspects of Xenopus skeletal muscle development, including somite organization, migration of hypaxial muscle anlagen toward the ventral abdomen, and development of jaw muscle. From a microarray screen, we have identified multiple candidate targets of EBF activity with known roles in muscle development. The candidate targets we have verified are MYOD, MYF5, M-Cadherin and SEB-4. In vivo overexpression of the ebf2 and ebf3 genes leads to ectopic expression of these candidate targets, and knockdown of EBF activity causes downregulation of the endogenous expression of the candidate targets. Furthermore, we found that MYOD and MYF5 are likely to be direct targets. Finally we show that MYOD can upregulate the expression of ebf genes, indicating the presence of a positive feedback loop between EBF and MYOD that we find to be important for maintenance of MYOD expression in Xenopus. These results suggest that EBF activity is important for both stabilizing commitment and driving aspects of differentiation in Xenopus muscle cells.

Indexed as

AnimalsBasic Helix-Loop-Helix ProteinsCadherinsCell DifferentiationFeedback, PhysiologicalGene Expression Regulation, DevelopmentalIn Situ HybridizationMicroarray AnalysisMuscle DevelopmentMuscle, SkeletalMyoD ProteinMyogenic Regulatory Factor 5Reverse Transcriptase Polymerase Chain ReactionRNA-Binding ProteinsXenopusXenopus ProteinsBasic Helix-Loop-Helix ProteinsCadherinsebf2 protein, XenopusM-cadherinMyf5 protein, XenopusMyoD ProteinMyogenic Regulatory Factor 5RBM24 protein, XenopusRNA-Binding ProteinsXenopus Proteins

Identifiers

PMID21839736
PMCPMC3352962
OpenAlexW2024181965

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.