Evidence map›Paper›PMID 21835981›Full record

ArticleScience (New York, N.Y.)2011

Ribosome assembly factors prevent premature translation initiation by 40S assembly intermediates.

Bethany S Strunk, Cherisse R Loucks, Min Su, Harish Vashisth, Shanshan Cheng, Justin Schilling, Charles L Brooks, Katrin Karbstein, Georgios Skiniotis

Abstract read
In one paragraph

Article in Science (New York, N.Y.), 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 148 papers.

0numbers the graph read from it
0cells of the map it votes in
148citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

148 citing papers in PubMed.

  1. Article
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  16. Article
  17. Eukaryotic Ribosome assembly and Nucleocytoplasmic Transport.Methods in molecular biology (Clifton, N.J.) · 2022
    Article
  18. Review
  19. Article
  20. First Evidence of Function forPathogens (Basel, Switzerland) · 2021
    Article

88 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Bethany S StrunkChemical Biology Doctoral Program, University of Michigan, Ann Arbor, MI 48109, USA.
Cherisse R Loucks
Min Su
Harish Vashisth
Shanshan Cheng
Justin Schilling
Charles L Brooks
Katrin Karbstein
Georgios Skiniotis

Funding

WEB BASED DOCUMENTATION &TUTORIALS FOR YAMMPP41RR012255 · NCRR · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI BROOKS, CHARLES L · 1997 to 2009
$10.4M
Quality Control in Ribosome Assembly - the Function of Regulatory ProteinsR01GM086451 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI KARBSTEIN, KATRIN · 2009 to 2019
$4.8M
NCRR NIH HHS P41 RR012255NCRR NIH HHS RR12255NIGMS NIH HHS R01 GM086451NIGMS NIH HHS R01-GM086451
6 · The paper itself

Abstract

Ribosome assembly in eukaryotes requires approximately 200 essential assembly factors (AFs) and occurs through ordered events that initiate in the nucleolus and culminate in the cytoplasm. Here, we present the electron cryo-microscopy (cryo-EM) structure of a late cytoplasmic 40S ribosome assembly intermediate from Saccharomyces cerevisiae at 18 angstrom resolution. We obtained cryo-EM reconstructions of preribosomal complexes lacking individual components to define the positions of all seven AFs bound to this intermediate. These late-binding AFs are positioned to prevent each step in the translation initiation pathway. Together, they obstruct the binding sites for initiation factors, prevent the opening of the messenger RNA channel, block 60S subunit joining, and disrupt the decoding site. These redundant mechanisms probably ensure that pre-40S particles do not enter the translation pathway, which would result in their rapid degradation.

Indexed as

Peptide Chain Initiation, TranslationalBinding SitesCryoelectron MicroscopyEukaryotic Initiation Factor-1Eukaryotic Initiation Factor-3Image Processing, Computer-AssistedMethyltransferasesModels, MolecularNuclear ProteinsProtein Serine-Threonine KinasesRibosomal ProteinsRibosome Subunits, Small, EukaryoticRNA, FungalRNA, MessengerSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsDIM1 protein, S cerevisiaeEukaryotic Initiation Factor-1Eukaryotic Initiation Factor-3eukaryotic peptide initiation factor-1ALTV1 protein, S cerevisiaeMethyltransferasesNOB1 protein, S cerevisiaeNuclear ProteinsProtein Serine-Threonine KinasesRibosomal ProteinsRio2 protein, S cerevisiaeRNA, FungalRNA, MessengerSaccharomyces cerevisiae Proteins

Identifiers

PMID21835981
PMCPMC3402165

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.