Evidence map›Paper›PMID 21835447›Full record

ArticleCell2011

Dynamic exchange at regulatory elements during chromatin remodeling underlies assisted loading mechanism.

Ty C Voss, R Louis Schiltz, Myong-Hee Sung, Paul M Yen, John A Stamatoyannopoulos, Simon C Biddie, Thomas A Johnson, Tina B Miranda, Sam John, Gordon L Hager

Open access · bronzeAbstract read
In one paragraph

Article in Cell, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 209 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
209citing papers in PubMed, 1 pooled it
11.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

209 citing papers in PubMed, 1 synthesis or guideline pooled it, 308 citations in OpenAlex.

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  19. The glucocorticoid receptor potentiates aldosterone-induced transcription by the mineralocorticoid receptor.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  20. Article

149 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Ty C VossLaboratory of Receptor Biology and Gene Expression, Building 41, B602, 41 Library Drive, National Cancer Institute, National Institutes of Health, Bethesda, MD 20892, USA.
R Louis Schiltz
Myong-Hee Sung
Paul M Yen
John A Stamatoyannopoulos
Simon C Biddie
Thomas A Johnson
Tina B Miranda
Sam John
Gordon L Hager
National Institutes of Health · USNational University of Singapore · SGUniversity of Washington · US

Funding

Chromatin Structure and Gene ExpressionZIABC005450 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI HAGER, GORDON L · 2009 to 2025
$35.2M
Intramural NIH HHS ZIA BC005450
6 · The paper itself

Abstract

The glucocorticoid receptor (GR), like other eukaryotic transcription factors, regulates gene expression by interacting with chromatinized DNA response elements. Photobleaching experiments in living cells indicate that receptors transiently interact with DNA on the time scale of seconds and predict that the response elements may be sparsely occupied on average. Here, we show that the binding of one receptor at the glucocorticoid response element (GRE) does not reduce the steady-state binding of another receptor variant to the same GRE. Mathematical simulations reproduce this noncompetitive state using short GR/GRE residency times and relatively long times between DNA binding events. At many genomic sites where GR binding causes increased chromatin accessibility, concurrent steady-state binding levels for the variant receptor are actually increased, a phenomenon termed assisted loading. Temporally sparse transcription factor-DNA interactions induce local chromatin reorganization, resulting in transient access for binding of secondary regulatory factors.

Indexed as

Chromatin Assembly and DisassemblyResponse ElementsAdenosine TriphosphateAnimalsCell Line, TumorMammary Tumor Virus, MouseMiceModels, BiologicalMonte Carlo MethodNucleosomesReceptors, EstrogenReceptors, GlucocorticoidRegulatory Sequences, Nucleic AcidTranscription FactorsAdenosine TriphosphateNucleosomesReceptors, EstrogenReceptors, GlucocorticoidTranscription Factors

Identifiers

PMID21835447
PMCPMC3210475
OpenAlexW1963958393

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.