Evidence map›Paper›PMID 21834587›Full record

ArticleJournal of chemical information and modeling2011

Discovery of novel selective serotonin reuptake inhibitors through development of a protein-based pharmacophore.

Sankar Manepalli, Laura M Geffert, Christopher K Surratt, Jeffry D Madura

Abstract read
In one paragraph

Article in Journal of chemical information and modeling, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.3field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 34 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Review
  6. Article
  7. Article
  8. Differentiated HT22 cells as a novel model forFrontiers in pharmacology · 2022
    Article
  9. Article
  10. Article
  11. Review
  12. Review
  13. Identification of novel serotonin transporter compounds by virtual screening.Journal of chemical information and modeling · 2014
    Article
  14. Article
  15. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Sankar ManepalliDepartment of Chemistry and Biochemistry and Center for Computational Sciences, Duquesne University, Pittsburgh, Pennsylvania 15282, United States.
Laura M Geffert
Christopher K Surratt
Jeffry D Madura
Duquesne University · USMylan (United States) · US

Funding

CRCNS: Computational and experimental study of dopamine and serotonin transporterR01DA027806 · NIDA · DUQUESNE UNIVERSITY · PI MADURA, JEFFRY D. · 2009 to 2013
$1.5M
Dopamine Transporter Structure and FunctionR01DA026530 · NIDA · DUQUESNE UNIVERSITY · PI SURRATT, CHRISTOPHER K · 2009 to 2010
$627k
NIDA NIH HHS DA026350NIDA NIH HHS DA027806NIDA NIH HHS R01 DA026530NIDA NIH HHS R01 DA027806
6 · The paper itself

Abstract

The serotonin transporter (SERT), a member of the neurotransmitter sodium symporter (NSS) family, is responsible for the reuptake of serotonin from the synaptic cleft to maintain neurotransmitter homeostasis. SERT is established as an important target in the treatment of anxiety and depression. Because a high-resolution crystal structure is not available, a computational model of SERT was built based upon the X-ray coordinates of the leucine transporter LeuT, a bacterial NSS homologue. The model was used to develop the first SERT structure-based pharmacophore. Virtual screening (VS) of a small molecule structural library using the generated SERT computational model yielded candidate ligands of diverse scaffolds. Pharmacological analysis of the VS hits identified two SERT-selective compounds, potential lead compounds for further SERT-related medication development.

Indexed as

Drug DiscoveryHomeostasisProteinsSelective Serotonin Reuptake InhibitorsSmall Molecule LibrariesProteinsSelective Serotonin Reuptake InhibitorsSmall Molecule Libraries

Identifiers

PMID21834587
PMCPMC3183329
OpenAlexW2023867754

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.