Evidence map›Paper›PMID 21832187›Full record

ArticleThe Journal of neuroscience : the official journal of the Society for Neuroscience2011

A new kinetic framework for synaptic vesicle trafficking tested in synapsin knock-outs.

Thomas Gabriel, Elizabeth García-Pérez, Kashif Mahfooz, Joaquín Goñi, Rebeca Martínez-Turrillas, Isabel Pérez-Otaño, Donald C Lo, John F Wesseling

Abstract readComparative Study
In one paragraph

Article in The Journal of neuroscience : the official journal of the Society for Neuroscience, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed.

  1. Article
  2. Article
  3. A sequential two-step priming scheme reproduces diversity in synaptic strength and short-term plasticity.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. The structure and function of 'active zone material' at synapses.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2015
    Review
  13. Quantitative analysis of vesicle recycling at the calyx of Held synapse.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
  14. Article
  15. ATP binding to synaspsin IIa regulates usage and clustering of vesicles in terminals of hippocampal neurons.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2015
    Article
  16. Article
  17. Review
  18. Article
  19. Synaptic vesicle pools and dynamics.Cold Spring Harbor perspectives in biology · 2012
    Review
  20. Synapsin selectively controls the mobility of resting pool vesicles at hippocampal terminals.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2012
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Thomas GabrielDepartamento de Neurociencias, Centro de Investigación Médica Aplicada, Universidad de Navarra, 31008 Pamplona, Spain.
Elizabeth García-Pérez
Kashif Mahfooz
Joaquín Goñi
Rebeca Martínez-Turrillas
Isabel Pérez-Otaño
Donald C Lo
John F Wesseling

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

At least two rate-limiting mechanisms in vesicle trafficking operate at mouse Schaffer collateral synapses, but their molecular/physical identities are unknown. The first mechanism determines the baseline rate at which reserve vesicles are supplied to a readily releasable pool. The second causes the supply rate to depress threefold when synaptic transmission is driven hard for extended periods. Previous models invoked depletion of a reserve vesicle pool to explain the reductions in the supply rate, but the mass-action assumption at their core is not compatible with kinetic measurements of neurotransmission under maximal-use conditions. Here we develop a new theoretical model of rate-limiting steps in vesicle trafficking that is compatible with previous and new measurements. A physical interpretation is proposed where local reserve pools consisting of four vesicles are tethered to individual release sites and are replenished stochastically in an all-or-none fashion. We then show that the supply rate depresses more rapidly in synapsin knock-outs and that the phenotype can be fully explained by changing the value of the single parameter in the model that would specify the size of the local reserve pools. Vesicle-trafficking rates between pools were not affected. Finally, optical imaging experiments argue against alternative interpretations of the theoretical model where vesicle trafficking is inhibited without reserve pool depletion. This new conceptual framework will be useful for distinguishing which of the multiple molecular and cell biological mechanisms involved in vesicle trafficking are rate limiting at different levels of synaptic throughput and are thus candidates for physiological and pharmacological modulation.

Indexed as

Models, NeurologicalAction PotentialsAnimalsCells, CulturedFemaleHippocampusMaleMiceMice, KnockoutPhenotypeProtein TransportSynapsinsSynaptic VesiclesSynapsins

Identifiers

PMID21832187
PMCPMC6623131

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.