Evidence map›Paper›PMID 21832019›Full record

ArticleJournal of clinical microbiology2011

Loop-mediated isothermal amplification assay for detection of Haemophilus influenzae type b in cerebrospinal fluid.

Dong Wook Kim, Paul Evan Kilgore, Eun Jin Kim, Soon Ae Kim, Dang Duc Anh, Mitsuko Seki

Erratum issuedOpen access · greenAbstract readComparative StudyEvaluation Study
In one paragraph

Article in Journal of clinical microbiology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
2.2field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 50 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Review
  6. Article
  7. Molecular Diagnostic Tools Applied for Assessing Microbial Water Quality.International journal of environmental research and public health · 2022
    Review
  8. Article
  9. Review
  10. A Rapid Detection ofFrontiers in cellular and infection microbiology · 2021
    Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Review
  16. Rapid and Accurate Diagnosis of Acute Pyogenic Meningitis Due toJournal of clinical and diagnostic research : JCDR · 2017
    Article
  17. Article
  18. Article
  19. Laboratory Diagnosis of Central Nervous System Infection.Current infectious disease reports · 2016
    Review
  20. Article
4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

6 authors at 3 institutions in 3 countries.

Dong Wook KimMolecular Bacteriology Laboratory, International Vaccine Institute, Seoul, Republic of Korea.
Paul Evan Kilgore
Eun Jin Kim
Soon Ae Kim
Dang Duc Anh
Mitsuko Seki
International Vaccine Institute · KRNational Institute Of Hygiene And Epidemiology · VNNihon University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Haemophilus influenzae type b (Hib) is one of the leading causes of meningitis in developing countries. To establish and evaluate a novel loop-mediated isothermal amplification (LAMP) assay for Hib, we designed a LAMP primer set targeting the Hib-specific capsulation locus. LAMP detected 10 copies of purified DNA in a 60-min reaction. This indicated that the detection limit of LAMP was >100-fold lower than the detection limits of both a PCR for the detection of bexA and a nested PCR for Hib (Hib PCR). No H. influenzae, other than Hib or control bacteria, was detected. Linear determination ranged from 10 to 1,000,000 microorganisms per reaction mixture using real-time turbidimetry. We evaluated the Hib LAMP assay using a set of 52 randomly selected cerebrospinal fluid (CSF) specimens obtained from children with suspected meningitis. For comparison, the CSF specimens were tested using a conventional Hib PCR assay. Hib was detected in 30 samples using LAMP and in 22 samples using the Hib PCR assay. The Hib PCR showed a clinical sensitivity of 73.3% and a clinical specificity of 100% relative to the Hib LAMP assay. These results suggest that further development and evaluation of the Hib LAMP will enhance the global diagnostic capability for Hib detection.

Indexed as

Bacteriological TechniquesCerebrospinal FluidDNA PrimersHaemophilus influenzae type bHumansMeningitis, HaemophilusMolecular Diagnostic TechniquesNucleic Acid Amplification TechniquesSensitivity and SpecificityTemperatureTime FactorsDNA Primers

Identifiers

PMID21832019
PMCPMC3187296
OpenAlexW2091575535

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.