ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2011
Nucleotide diversity of a genomic sequence similar to SHATTERPROOF (PvSHP1) in domesticated and wild common bean (Phaseolus vulgaris L.).
Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.
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Who cites it
15 citing papers in PubMed.
- Genetic Diversity and Population Structure of Common Bean (Plants (Basel, Switzerland) · 2023Article
- Pod shattering in grain legumes: emerging genetic and environment-related patterns.The Plant cell · 2021Review
- Pod indehiscence in common bean is associated with the fine regulation of PvMYB26.Journal of experimental botany · 2021Article
- Molecular Hallmarks, Agronomic Performances and Seed Nutraceutical Properties to Exploit Neglected Genetic Resources of Common Beans Grown by Organic Farming in Two Contrasting Environments.Frontiers in plant science · 2021Article
- Genetic Diversity, Nitrogen Fixation, and Water Use Efficiency in a Panel of Honduran Common Bean (Plants (Basel, Switzerland) · 2020Article
- Current State and Perspectives in Population Genomics of the Common Bean.Plants (Basel, Switzerland) · 2020Review
- Diversification and genetic structure of the western-to-eastern progression of European Phaseolus vulgaris L. germplasm.BMC plant biology · 2019Article
- Review
- Agronomic Performance and Nitrogen Fixation of Heirloom and Conventional Dry Bean Varieties Under Low-Nitrogen Field Conditions.Frontiers in plant science · 2019Article
- Beans (Frontiers in plant science · 2017Review
- A Comprehensive Phenotypic Investigation of the "Pod-Shattering Syndrome" in Common Bean.Frontiers in plant science · 2017Article
- High Level of Nonsynonymous Changes in Common Bean Suggests That Selection under Domestication Increased Functional Diversity at Target Traits.Frontiers in plant science · 2016Article
- Decreased Nucleotide and Expression Diversity and Modified Coexpression Patterns Characterize Domestication in the Common Bean.The Plant cell · 2014Article
- Mesoamerican origin of the common bean (Phaseolus vulgaris L.) is revealed by sequence data.Proceedings of the National Academy of Sciences of the United States of America · 2012Article
- Chloroplast Microsatellite Diversity in Phaseolus vulgaris.Frontiers in plant science · 2012Article
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8 authors.
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Abstract
Evolutionary studies in plant and animal breeding are aimed at understanding the structure and organization of genetic variations of species. We have identified and characterized a genomic sequence in Phaseolus vulgaris of 1,200 bp (PvSHP1) that is homologous to SHATTERPROOF-1 (SHP1), a gene involved in control of fruit shattering in Arabidopsis thaliana. The PvSHP1 fragment was mapped to chromosome Pv06 in P. vulgaris and is linked to the flower and seed color gene V. Amplification of the PvSHP1 sequence from the most agronomically important legume species showed a high degree of interspecies diversity in the introns within the Phaseoleae, while the coding region was conserved across distant taxa. Sequencing of the PvSHP1 sequence in a sample of 91 wild and domesticated genotypes that span the geographic distribution of this species in the centers of origin showed that PvSHP1 is highly polymorphic and, therefore, particularly useful to further investigate the origin and domestication history of P. vulgaris. Our data confirm the gene pool structure seen in P. vulgaris along with independent domestication processes in the Andes and Mesoamerica; they provide additional evidence for a single domestication event in Mesoamerica. Moreover, our results support the Mesoamerican origin of this species. Finally, we have developed three indel-spanning markers that will be very useful for bean germplasm characterization, and particularly to trace the distribution of the domesticated Andean and Mesoamerican gene pools.
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