Evidence map›Paper›PMID 21828289›Full record

ArticleThe Plant cell2011

RopGEF7 regulates PLETHORA-dependent maintenance of the root stem cell niche in Arabidopsis.

Min Chen, Huili Liu, Jixiang Kong, Yali Yang, Naichao Zhang, Ruijing Li, Jianbin Yue, Jiaqing Huang, Chuanyou Li, Alice Y Cheung and 1 more

Open access · hybridAbstract read
In one paragraph

Article in The Plant cell, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
7.4field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 63 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. TheInternational journal of molecular sciences · 2024
    Article
  9. Article
  10. Article
  11. ROP signaling regulates spatial pattern of cell division and specification of meristem notch.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  12. Article
  13. Article
  14. eIF4E1 RegulatesFrontiers in plant science · 2022
    Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 2 countries.

Min ChenKey Laboratory of Ministry of Education for Rice Fertility Development and Stress Resistance, College of Life Sciences, South China Agricultural University, Guangzhou 510642, China.
Huili Liu
Jixiang Kong
Yali Yang
Naichao Zhang
Ruijing Li
Jianbin Yue
Jiaqing Huang
Chuanyou Li
Alice Y Cheung
Li-Zhen Tao
South China Agricultural University · CNState Key Laboratory of Plant Genomics · CNUniversity of Massachusetts Amherst · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The root stem cell niche defines the area that specifies and maintains the stem cells and is essential for the maintenance of root growth. Here, we characterize and examine the functional role of a quiescent center (QC)-expressed RAC/ROP GTPase activator, RopGEF7, in Arabidopsis thaliana. We show that RopGEF7 interacts with At RAC1 and overexpression of a C-terminally truncated constitutively active RopGEF7 (RopGEF7ΔC) activates RAC/ROP GTPases. Knockdown of RopGEF7 by RNA interference causes defects in embryo patterning and maintenance of the QC and leads to postembryonic loss of root stem cell population. Gene expression studies indicate that RopGEF7 is required for root meristem maintenance as it regulates the expression of PLETHORA1 (PLT1) and PLT2, which are key transcription factors that mediate the patterning of the root stem cell niche. Genetic analyses show that RopGEF7 interacts with PLT genes to regulate QC maintenance. Moreover, RopGEF7 is induced transcriptionally by auxin while its function is required for the expression of the auxin efflux protein PIN1 and maintenance of normal auxin maxima in embryos and seedling roots. These results suggest that RopGEF7 may integrate auxin-derived positional information in a feed-forward mechanism, regulating PLT transcription factors and thereby controlling the maintenance of root stem cell niches.

Indexed as

ArabidopsisArabidopsis ProteinsDNA, ComplementaryGene ExpressionGene Expression Regulation, PlantGuanine Nucleotide Exchange FactorsIndoleacetic AcidsMembrane Transport ProteinsMeristemMutationPlant RootsPlants, Genetically ModifiedRecombinant Fusion ProteinsRNA, PlantSeedlingsSignal TransductionArabidopsis ProteinsDNA, ComplementaryGuanine Nucleotide Exchange FactorsIndoleacetic AcidsMembrane Transport ProteinsPIN1 protein, ArabidopsisPLT1 protein, ArabidopsisPLT2 protein, ArabidopsisRAC1 protein, ArabidopsisRecombinant Fusion ProteinsRNA, PlantRopGEF7 protein, ArabidopsisTranscription Factors

Identifiers

PMID21828289
PMCPMC3180798
OpenAlexW2117201153

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.