Evidence map›Paper›PMID 21826087›Full record

ArticleThe pharmacogenomics journal2012

Nucleotide excision repair gene variants and association with survival in osteosarcoma patients treated with neoadjuvant chemotherapy.

P Biason, C M Hattinger, F Innocenti, R Talamini, M Alberghini, K Scotlandi, C Zanusso, M Serra, G Toffoli

Open access · bronzeAbstract read
In one paragraph

Article in The pharmacogenomics journal, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 45 papers, 10 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
45citing papers in PubMed, 10 pooled it
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

45 citing papers in PubMed, 10 syntheses or guidelines pooled it, 64 citations in OpenAlex.

  1. Pooled it
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  3. Aging · 2018
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  7. ERCC polymorphisms and prognosis of patients with osteosarcoma.Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine · 2014
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

P BiasonExperimental and Clinical Pharmacology Unit, Centro di Riferimento Oncologico, National Cancer Institute, Aviano, Italy.
C M Hattinger
F Innocenti
R Talamini
M Alberghini
K Scotlandi
C Zanusso
M Serra
G Toffoli
Centro di Riferimento Oncologico · ITIstituto Ortopedico Rizzoli · ITUniversity of North Carolina at Chapel Hill · US

Funding

Genome-Wide molecular epidemiology of treatment outcome and cancer riskK07CA140390 · NCI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI INNOCENTI, FEDERICO · 2009 to 2013
$648k
Genome-wide SNP genotyping and expression analysis in human liversR21DK081157 · NIDDK · UNIV OF NORTH CAROLINA CHAPEL HILL · PI INNOCENTI, FEDERICO · 2009 to 2010
$596k
A comprehensive pharmacogenetic study of sorafenib in renal cell carcinoma patienR21CA139280 · NCI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI INNOCENTI, FEDERICO · 2009 to 2010
$378k
NCI NIH HHS K07 CA140390NCI NIH HHS R21 CA139280NIDDK NIH HHS R21 DK081157
6 · The paper itself

Abstract

The aim of this study was to investigate the role of common polymorphisms in the nucleotide excision repair pathway genes in the tumorigenesis of osteosarcoma and in the response to DNA damaging therapies, such as cisplatin-based neoadjuvant therapy. Excision repair cross-complementing (ERCC) group 2 (XPD; rs13181 and rs1799793), group 5 (XPG; rs17655) and group 1 (XPA; rs3212986 and rs11615) polymorphisms were analyzed in a group of 130 homogenously treated patients with high-grade osteosarcoma, for association with event-free survival (EFS), using the Kaplan-Meier plots and log-rank test. A positive association was observed between both XPD single-nucleotide polymorphisms and an increased EFS (hazards ratio (HR) = 0.34, 95% confidence interval (CI) 0.12-0.98 and HR = 0.19, 95% CI 0.05-0.77, respectively). We had also performed a case-control study for relative risk to develop osteosarcoma. Patients carrying at least one variant allele of XPD rs1799793 had a reduced risk of developing osteosarcoma, compared with wild-type patients (odds ratio = 0.55, 95% CI 0.36-0.84). This study suggests that XPD rs1799793 could be a marker of osteosarcoma associated with features conferring either a better prognosis or a better outcome after platinum therapy, or both.

Indexed as

Polymorphism, Single NucleotideAdolescentAdultAgedBone NeoplasmsChildChild, PreschoolDNA RepairFemaleHumansMaleMiddle AgedNeoadjuvant TherapyOsteosarcomaXeroderma Pigmentosum Group D ProteinERCC2 protein, humanXeroderma Pigmentosum Group D Protein

Identifiers

PMID21826087
PMCPMC3935514
OpenAlexW2012006201

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.