Evidence map›Paper›PMID 21825172›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2011

Bacteria-induced natural product formation in the fungus Aspergillus nidulans requires Saga/Ada-mediated histone acetylation.

Hans-Wilhelm Nützmann, Yazmid Reyes-Dominguez, Kirstin Scherlach, Volker Schroeckh, Fabian Horn, Agnieszka Gacek, Julia Schümann, Christian Hertweck, Joseph Strauss, Axel A Brakhage

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 140 papers.

0numbers the graph read from it
0cells of the map it votes in
140citing papers in PubMed
21.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

140 citing papers in PubMed, 326 citations in OpenAlex.

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  6. The regulatory network ofMicrobiology spectrum · 2025
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  7. Review
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  11. Epigenetic Regulation of Fungal Secondary Metabolism.Journal of fungi (Basel, Switzerland) · 2024
    Review
  12. Review
  13. Article
  14. Article
  15. Article
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  17. Article
  18. Molecular regulation of fungal secondary metabolism.World journal of microbiology & biotechnology · 2023
    Review
  19. Review
  20. The Growth and Conidiation ofJournal of fungi (Basel, Switzerland) · 2023
    Article

80 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 3 countries.

Hans-Wilhelm NützmannDepartment of Molecular and Applied Microbiology, Leibniz Institute for Natural Product Research and Infection Biology-Hans Knöll Institute, 07745 Jena, Germany.
Yazmid Reyes-Dominguez
Kirstin Scherlach
Volker Schroeckh
Fabian Horn
Agnieszka Gacek
Julia Schümann
Christian Hertweck
Joseph Strauss
Axel A Brakhage
Molecular Research Institute · USBOKU University · ATFriedrich Schiller University Jena · DEAustrian Institute of Technology · ATLeibniz-Institut für Naturstoff-Forschung und Infektionsbiologie e. V. - Hans-Knöll-Institut (HKI) · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Sequence analyses of fungal genomes have revealed that the potential of fungi to produce secondary metabolites is greatly underestimated. In fact, most gene clusters coding for the biosynthesis of antibiotics, toxins, or pigments are silent under standard laboratory conditions. Hence, it is one of the major challenges in microbiology to uncover the mechanisms required for pathway activation. Recently, we discovered that intimate physical interaction of the important model fungus Aspergillus nidulans with the soil-dwelling bacterium Streptomyces rapamycinicus specifically activated silent fungal secondary metabolism genes, resulting in the production of the archetypal polyketide orsellinic acid and its derivatives. Here, we report that the streptomycete triggers modification of fungal histones. Deletion analysis of 36 of 40 acetyltransferases, including histone acetyltransferases (HATs) of A. nidulans, demonstrated that the Saga/Ada complex containing the HAT GcnE and the AdaB protein is required for induction of the orsellinic acid gene cluster by the bacterium. We also showed that Saga/Ada plays a major role for specific induction of other biosynthesis gene clusters, such as sterigmatocystin, terrequinone, and penicillin. Chromatin immunoprecipitation showed that the Saga/Ada-dependent increase of histone 3 acetylation at lysine 9 and 14 occurs during interaction of fungus and bacterium. Furthermore, the production of secondary metabolites in A. nidulans is accompanied by a global increase in H3K14 acetylation. Increased H3K9 acetylation, however, was only found within gene clusters. This report provides previously undescribed evidence of Saga/Ada dependent histone acetylation triggered by prokaryotes.

Indexed as

AcetylationAspergillus nidulansBiocatalysisBiological ProductsFungal ProteinsGene DeletionGene Expression Regulation, FungalGenes, FungalHistone AcetyltransferasesHistonesModels, BiologicalMultigene FamilyPromoter Regions, GeneticResorcinolsSalicylatesSterigmatocystinBiological ProductsFungal ProteinsHistone AcetyltransferasesHistoneslecanoric acidorsellinic acidResorcinolsSalicylatesSterigmatocystin

Identifiers

PMID21825172
PMCPMC3161617
OpenAlexW2029783392

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.