Evidence map›Paper›PMID 21823653›Full record

ReviewBiochemistry2011

Pericyclic reactions catalyzed by chorismate-utilizing enzymes.

Audrey L Lamb

Abstract readComparative StudyReview
In one paragraph

Review in Biochemistry, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.3field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 39 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Review
  8. Review
  9. Review
  10. An Open and Shut Case: The Interaction of Magnesium with MST Enzymes.Journal of the American Chemical Society · 2016
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

1 author at 1 institution in 1 country.

Audrey L LambDepartment of Molecular Biosciences, University of Kansas, Lawrence, Kansas 66045, United States. lamb@ku.edu
University of Kansas · US

Funding

UNDERSTANDING THE ROLE OF SMALL RNAS IN ARABIDOPSIS POLLEN DEVELOPMENTP20RR016475 · NCRR · UNIVERSITY OF KANSAS MEDICAL CENTER · PI LUSHINGTON, GERALD H · 2001 to 2011
$38.1M
Salicylate production in siderophore biosynthesisR01AI077725 · NIAID · UNIVERSITY OF KANSAS LAWRENCE · PI LAMB, AUDREY L · 2009 to 2012
$1.2M
Structure-function analyses of siderophore biosynthetic enzymesK02AI093675 · NIAID · UNIVERSITY OF KANSAS LAWRENCE · PI LAMB, AUDREY L · 2011 to 2014
$428k
NCRR NIH HHS P20 RR016475NIAID NIH HHS K02 AI093675NIAID NIH HHS R01 AI077725NIAID NIH HHS R01 AI77725
6 · The paper itself

Abstract

One of the fundamental questions of enzymology is how catalytic power is derived. This review focuses on recent developments in the structure--function relationships of chorismate-utilizing enzymes involved in siderophore biosynthesis to provide insight into the biocatalysis of pericyclic reactions. Specifically, salicylate synthesis by the two-enzyme pathway in Pseudomonas aeruginosa is examined. The isochorismate-pyruvate lyase is discussed in the context of its homologues, the chorismate mutases, and the isochorismate synthase is compared to its homologues in the MST family (menaquinone, siderophore, or tryptophan biosynthesis) of enzymes. The tentative conclusion is that the activities observed cannot be reconciled by inspection of the active site participants alone. Instead, individual activities must arise from unique dynamic properties of each enzyme that are tuned to promote specific chemistries.

Indexed as

Bacterial ProteinsBinding SitesCatalysisChorismate MutaseCrystallography, X-RayIsoenzymesMolecular Dynamics SimulationProtein BindingPseudomonas aeruginosaBacterial ProteinsChorismate MutaseIsoenzymes

Identifiers

PMID21823653
PMCPMC3164438
OpenAlexW2043462009

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.